contig_metadata
5 rows where bioproject = "PRJNA448207", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15741576 | 15741576 | PRJNA448207_P_NODE_7233_length_452_cov_1.588391_g7071_i0 | PRJNA448207 | 7233 | 452 | 1.588391 | 7.17952732 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 459 | 2.2099999999999993e-124 | NTclustered | gi|2874253793|emb|OY969777.1| | 412056 | g7071 | i0 | 85.275 | 251.601769911504 | 455 | 55 | 99 | 12 | 5 | 452 | 2366129 | 2365680 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 | blastn | 113724 | 459 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 17015839 | 17015839 | PRJNA448207_P_NODE_13834_length_340_cov_0.951311_g13671_i0 | PRJNA448207 | 13834 | 340 | 0.951311 | 3.2344574 | uncultured Verrucomicrobiales bacterium | 100234 | Bacteria | Bacteria | 527 | 4.3799999999999985e-145 | NTclustered | gi|220682330|gb|FJ542937.1| | 100234 | g13671 | i0 | 95.195 | 95.95 | 333 | 16 | 98 | 0 | 8 | 340 | 67 | 399 | Uncultured Verrucomicrobiales bacterium clone B01-06A 16S ribosomal RNA gene, partial sequence | blastn | 32623 | 527 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | uncultured Verrucomicrobiales bacterium | |||
| 28876062 | 28876062 | PRJNA448207_P_NODE_30888_length_244_cov_0.900585_g30725_i0 | PRJNA448207 | 30888 | 244 | 0.900585 | 2.1974274 | Opitutus sp. | 1913982 | Bacteria | Bacteria | 40.4 | 0.0487 | NR | HYD84722.1 | 1913982 | g30725 | i0 | 42.9 | 0.516393442622951 | 42 | 24 | 51.6 | 0 | 168 | 43 | 39 | 80 | HYD84722.1 hypothetical protein [Opitutus sp.] | diamond | 126 | 40.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 30644605 | 30644605 | PRJNA448207_P_NODE_14213_length_336_cov_1.121673_g14050_i0 | PRJNA448207 | 14213 | 336 | 1.121673 | 3.76882128 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 87 | 3.32e-17 | NR | MEO7933490.1 | 2201154 | g14050 | i0 | 48.3 | 0.794642857142857 | 89 | 44 | 79.5 | 1 | 267 | 1 | 13 | 99 | MEO7933490.1 aminomethyl-transferring glycine dehydrogenase [Chthoniobacterales bacterium] | diamond | 267 | 87 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 31023959 | 31023959 | PRJNA448207_P_NODE_20855_length_282_cov_0.779904_g20692_i0 | PRJNA448207 | 20855 | 282 | 0.779904 | 2.19932928 | Opitutia bacterium ISCC 51 | 2684115 | Bacteria | Bacteria | 44.3 | 0.0114 | NR | QXD22500.1 | 2684115 | g20692 | i0 | 40.9 | 0.468085106382979 | 44 | 26 | 46.8 | 0 | 113 | 244 | 91 | 134 | QXD22500.1 hypothetical protein F7C95_11090 [Opitutia bacterium ISCC 51] | diamond | 132 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium ISCC 51 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;