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contig_metadata

12 rows where bioproject = "PRJNA446034" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 12 ✖

bioproject 1

  • PRJNA446034 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2988825 2988825 PRJNA446034_S_NODE_3203_length_339_cov_8.407285_g3166_i0 PRJNA446034 3203 339 8.407285 28.50069615 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 70.9 8.99e-12   NR MEK9698159.1 2163009 g3166 i0 52.3 1.38938053097345 65 31 57.5 0 2 196 29 93 MEK9698159.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 471 70.9 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
9366229 9366229 PRJNA446034_S_NODE_62008_length_174_cov_5.014599_g61971_i0 PRJNA446034 62008 174 5.014599 8.72540226 root 1 Root_unresolved Root_unresolved 89.4 2.5e-19   NR HIH96087.1 1906666 g61971 i0 62.1 54.948275862069 58 22 100 0 1 174 139 196 HIH96087.1 modification methylase [Thermoplasmata archaeon] diamond 9561 90.1 0.992230854605993 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
9366303 9366303 PRJNA446034_S_NODE_78168_length_165_cov_1.968750_g78131_i0 PRJNA446034 78168 165 1.96875 3.2484375 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 183 4.69e-42   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g78131 i0 86.667 1 165 22 100 0 1 165 2604408 2604244 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 165 183 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
18289688 18289688 PRJNA446034_S_NODE_107815_length_152_cov_5.843478_g107778_i0 PRJNA446034 107815 152 5.843478 8.88208656 uncultured crenarchaeote 29281 Archaea Archaea 156 9.21e-34   NTclustered gi|22797874|emb|AJ496176.1| 29281 g107778 i0 85.333 0.986842105263158 150 22 99 0 1 150 25445 25296 Uncultured crenarchaeote 34 kb genomic fragment blastn 150 156 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
26664215 26664215 PRJNA446034_S_NODE_63761_length_173_cov_3.757353_g63724_i0 PRJNA446034 63761 173 3.757353 6.50022069 archaeon 1906665 Archaea Archaea 111 5.01e-30   NR NDB55191.1 1906665 g63724 i0 89.5 0.988439306358382 57 5 97.1 1 168 1 35 91 NDB55191.1 hypothetical protein [archaeon] diamond 171 111 1 Archaea               archaeon
26727417 26727417 PRJNA446034_S_NODE_22461_length_220_cov_2.256831_g22424_i0 PRJNA446034 22461 220 2.256831 4.9650282 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 149 3.65e-40   NR MDW0134199.1 2169593 g22424 i0 98.6 1.99090909090909 73 1 99.5 0 220 2 21 93 MDW0134199.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 438 149 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27802713 27802713 PRJNA446034_S_NODE_72484_length_168_cov_2.396947_g72447_i0 PRJNA446034 72484 168 2.396947 4.02687096 Nanobdellota archaeon 2026764 Archaea Archaea 42 0.0251   NR MEA2037021.1 2026764 g72447 i0 70 0.357142857142857 20 6 35.7 0 2 61 405 424 MEA2037021.1 N4-gp56 family major capsid protein [Nanoarchaeota archaeon] diamond 60 42 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28434110 28434110 PRJNA446034_S_NODE_66866_length_171_cov_3.895522_g66829_i0 PRJNA446034 66866 171 3.895522 6.66134262 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 77.4 7.95e-15   NR MBI2629662.1 2026773 g66829 i0 60.7 1.96491228070175 56 22 98.2 0 3 170 40 95 MBI2629662.1 CoA-binding protein [Candidatus Pacearchaeota archaeon] diamond 336 77.4 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28686903 28686903 PRJNA446034_S_NODE_5327_length_303_cov_2.135338_g5290_i0 PRJNA446034 5327 303 2.135338 6.47007414 Methanosarcina sp. 2213 Archaea Archaea 125 2.5699999999999997e-32   NR HET8689160.1 2213 g5290 i0 62.9 2.71287128712871 89 33 88.1 0 295 29 19 107 HET8689160.1 ribonucleotide-diphosphate reductase subunit beta [Methanosarcina sp.] diamond 822 125 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30897661 30897661 PRJNA446034_S_NODE_2614_length_355_cov_4.433962_g2577_i0 PRJNA446034 2614 355 4.433962 15.7405651 Sulfolobaceae archaeon 2967306 Archaea Archaea 73.2 1.4e-14   NR MEM0173286.1 2967306 g2577 i0 65.5 0.464788732394366 55 16 46.5 1 241 77 6 57 MEM0173286.1 hypothetical protein [Sulfolobaceae archaeon] diamond 165 73.2 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon
30897662 30897662 PRJNA446034_S_NODE_28354_length_209_cov_3.075581_g28317_i0 PRJNA446034 28354 209 3.075581 6.42796429 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 43.5 0.0121   NR MFA5246994.1 3018267 g28317 i0 39 0.588516746411483 41 25 58.9 0 183 61 174 214 MFA5246994.1 stage II sporulation protein M [Candidatus Micrarchaeia archaeon] diamond 123 43.5 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon
32099138 32099138 PRJNA446034_S_NODE_51858_length_182_cov_2.544828_g51821_i0 PRJNA446034 51858 182 2.544828 4.63158696 Methanobacterium sp. 2164 Archaea Archaea 67.4 5.89e-12   NR MEN6290762.1 2164 g51821 i0 56.4 0.906593406593407 55 21 90.7 1 3 167 68 119 MEN6290762.1 HNH endonuclease signature motif containing protein [Methanobacterium sp.] diamond 165 67.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;