RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA446034", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA446034 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18289688 18289688 PRJNA446034_S_NODE_107815_length_152_cov_5.843478_g107778_i0 PRJNA446034 107815 152 5.843478 8.88208656 uncultured crenarchaeote 29281 Archaea Archaea 156 9.21e-34   NTclustered gi|22797874|emb|AJ496176.1| 29281 g107778 i0 85.333 0.986842105263158 150 22 99 0 1 150 25445 25296 Uncultured crenarchaeote 34 kb genomic fragment blastn 150 156 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
30897661 30897661 PRJNA446034_S_NODE_2614_length_355_cov_4.433962_g2577_i0 PRJNA446034 2614 355 4.433962 15.7405651 Sulfolobaceae archaeon 2967306 Archaea Archaea 73.2 1.4e-14   NR MEM0173286.1 2967306 g2577 i0 65.5 0.464788732394366 55 16 46.5 1 241 77 6 57 MEM0173286.1 hypothetical protein [Sulfolobaceae archaeon] diamond 165 73.2 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae   Sulfolobaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;