RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA446034", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA446034 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9366303 9366303 PRJNA446034_S_NODE_78168_length_165_cov_1.968750_g78131_i0 PRJNA446034 78168 165 1.96875 3.2484375 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 183 4.69e-42   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g78131 i0 86.667 1 165 22 100 0 1 165 2604408 2604244 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 165 183 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
26727417 26727417 PRJNA446034_S_NODE_22461_length_220_cov_2.256831_g22424_i0 PRJNA446034 22461 220 2.256831 4.9650282 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 149 3.65e-40   NR MDW0134199.1 2169593 g22424 i0 98.6 1.99090909090909 73 1 99.5 0 220 2 21 93 MDW0134199.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 438 149 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;