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contig_metadata

18 rows where bioproject = "PRJNA446034" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 18 ✖

tax_kingdom 1

bioproject 1

  • PRJNA446034 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
438296 438296 PRJNA446034_S_NODE_56161_length_178_cov_8.758865_g56124_i0 PRJNA446034 56161 178 8.758865 15.5907797 Acidobacteriota bacterium 1978231 Bacteria Bacteria 193 8.5e-45   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g56124 i0 86.592 31.8820224719101 179 19 99 4 1 176 3298366 3298190 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 5675 193 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
10641896 10641896 PRJNA446034_S_NODE_106269_length_153_cov_2.301724_g106232_i0 PRJNA446034 106269 153 2.301724 3.52163772 Acidobacteriota 57723 Bacteria Bacteria 99.4 1.23e-22   NR MBL8180107.1 2052146 g106232 i0 90 5.88235294117647 50 5 98 0 152 3 423 472 MBL8180107.1 sigma 54-interacting transcriptional regulator [Blastocatellia bacterium] diamond 900 99.8 0.995991983967936 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
11916749 11916749 PRJNA446034_S_NODE_106430_length_153_cov_2.060345_g106393_i0 PRJNA446034 106430 153 2.060345 3.15232785 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 101 3.61e-24   NR MBX7171873.1 2283092 g106393 i0 94 1.96078431372549 50 3 98 0 4 153 242 291 MBX7171873.1 SDR family oxidoreductase [Pyrinomonadaceae bacterium] diamond 300 101 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
17015528 17015528 PRJNA446034_S_NODE_42194_length_191_cov_1.779221_g42157_i0 PRJNA446034 42194 191 1.779221 3.39831211 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 80.9 1.89e-18   NR HNU07124.1 2283092 g42157 i0 55.6 0.989528795811518 63 28 99 0 190 2 1 63 HNU07124.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 189 80.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
24664336 24664336 PRJNA446034_S_NODE_25300_length_214_cov_4.519774_g25263_i0 PRJNA446034 25300 214 4.519774 9.67231636 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 357 3.5699999999999996e-94   NTclustered gi|399532232|gb|JQ627516.1| 171953 g25263 i0 97.156 98.5467289719626 211 6 99 0 1 211 18 228 Uncultured Acidobacteria bacterium clone B1_6_1B_104 small subunit ribosomal RNA gene, partial sequence blastn 21089 357 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
27076012 27076012 PRJNA446034_S_NODE_36642_length_197_cov_3.850000_g36605_i0 PRJNA446034 36642 197 3.85 7.5845 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 115 3.65e-28   NR MCY7346853.1 2283092 g36605 i0 86.2 3.95939086294416 65 9 99 0 1 195 224 288 MCY7346853.1 diguanylate cyclase [Pyrinomonadaceae bacterium] diamond 780 115 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28497313 28497313 PRJNA446034_S_NODE_52907_length_181_cov_3.173611_g52870_i0 PRJNA446034 52907 181 3.173611 5.7442359099999996 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 120 5.83e-30   NR MCY7377390.1 2283092 g52870 i0 98.3 1.98895027624309 60 1 99.4 0 180 1 46 105 MCY7377390.1 type VI secretion system baseplate subunit TssF [Pyrinomonadaceae bacterium] diamond 360 120 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28528936 28528936 PRJNA446034_S_NODE_111667_length_151_cov_3.263158_g111630_i0 PRJNA446034 111667 151 3.263158 4.9273685800000004 Acidobacteriota bacterium 1978231 Bacteria Bacteria 90.9 9.96e-20   NR HEY7161854.1 1978231 g111630 i0 90 0.993377483443709 50 5 99.3 0 1 150 164 213 HEY7161854.1 iron chelate uptake ABC transporter family permease subunit [Acidobacteriota bacterium] diamond 150 90.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29034192 29034192 PRJNA446034_S_NODE_14908_length_240_cov_6.443350_g14871_i0 PRJNA446034 14908 240 6.44335 15.46404 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 68.6 1.25e-11   NR MEJ7847183.1 2283092 g14871 i0 48.6 0.9 72 36 88.8 1 1 213 57 128 MEJ7847183.1 ankyrin repeat domain-containing protein [Pyrinomonadaceae bacterium] diamond 216 68.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29381277 29381277 PRJNA446034_S_NODE_32529_length_203_cov_1.385542_g32492_i0 PRJNA446034 32529 203 1.385542 2.81265026 Terracidiphilus sp. 1964191 Bacteria Bacteria 59.3 1.33e-9   NR HZL53773.1 1964191 g32492 i0 73 0.54679802955665 37 10 54.7 0 142 32 50 86 HZL53773.1 hypothetical protein [Terracidiphilus sp.] diamond 111 59.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
30123739 30123739 PRJNA446034_S_NODE_19412_length_227_cov_3.015789_g19375_i0 PRJNA446034 19412 227 3.015789 6.84584103 Bacteria 2 Bacteria Bacteria 132 5.619999999999999e-38   NR MDQ3374934.1 1978231 g19375 i0 80 3.93832599118943 75 15 99.1 0 225 1 29 103 MDQ3374934.1 hypothetical protein [Acidobacteriota bacterium] diamond 894 132 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30202185 30202185 PRJNA446034_S_NODE_83532_length_162_cov_3.512000_g83495_i0 PRJNA446034 83532 162 3.512 5.68944 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 88.6 4.63e-19   NR HVD91225.1 2910147 g83495 i0 69.8 0.981481481481482 53 16 98.1 0 160 2 117 169 HVD91225.1 hypothetical protein [Vicinamibacterales bacterium] diamond 159 88.6 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30518370 30518370 PRJNA446034_S_NODE_7793_length_277_cov_6.450000_g7756_i0 PRJNA446034 7793 277 6.45 17.8665 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 64.3 1.46e-9   NR HEY3040394.1 2283092 g7756 i0 57.4 0.660649819494585 61 23 62.8 1 183 10 160 220 HEY3040394.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 183 64.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30834317 30834317 PRJNA446034_S_NODE_20094_length_225_cov_5.154255_g20057_i0 PRJNA446034 20094 225 5.154255 11.59707375 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 91.7 9.49e-21   NR HEX9961491.1 2283092 g20057 i0 64.5 1.98666666666667 76 20 92 2 208 2 7 82 HEX9961491.1 YceI family protein [Pyrinomonadaceae bacterium] diamond 447 91.7 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31023949 31023949 PRJNA446034_S_NODE_83395_length_162_cov_4.000000_g83358_i0 PRJNA446034 83395 162 4 6.48 Acidobacteriota bacterium 1978231 Bacteria Bacteria 101 1.58e-25   NR MEO8073315.1 1978231 g83358 i0 90.7 1 54 5 100 0 1 162 72 125 MEO8073315.1 hypothetical protein [Acidobacteriota bacterium] diamond 162 101 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31687853 31687853 PRJNA446034_S_NODE_27737_length_210_cov_3.213873_g27700_i0 PRJNA446034 27737 210 3.213873 6.7491333 Candidatus Sulfopaludibacter sp. SbA4 2043165 Bacteria Bacteria 66.2 1.06e-10   NR SPF49530.1 2043165 g27700 i0 86.5 1.05714285714286 37 5 52.9 0 209 99 140 176 SPF49530.1 conserved hypothetical protein [Candidatus Sulfopaludibacter sp. SbA4] diamond 222 66.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Sulfopaludibacter Candidatus Sulfopaludibacter sp. SbA4
31845945 31845945 PRJNA446034_S_NODE_31457_length_204_cov_4.215569_g31420_i0 PRJNA446034 31457 204 4.215569 8.59976076 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 117 1.77e-32   NR MEO7508862.1 2283092 g31420 i0 91 0.985294117647059 67 6 98.5 0 4 204 30 96 MEO7508862.1 threonine/serine exporter family protein [Pyrinomonadaceae bacterium] diamond 201 117 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32574050 32574050 PRJNA446034_S_NODE_86759_length_161_cov_1.314516_g86722_i0 PRJNA446034 86759 161 1.314516 2.11637076 Acidobacteriota bacterium 1978231 Bacteria Bacteria 81.3 2.43e-16   NR MBA3631497.1 1978231 g86722 i0 85.1 3.50310559006211 47 7 87.6 0 3 143 310 356 MBA3631497.1 PQQ-dependent sugar dehydrogenase [Acidobacteriota bacterium] diamond 564 81.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;