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contig_metadata

10 rows where bioproject = "PRJNA446034" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 10 ✖

bioproject 1

  • PRJNA446034 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5541907 5541907 PRJNA446034_S_NODE_285_length_649_cov_59.124183_g265_i0 PRJNA446034 285 649 59.124183 383.71594767 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 909 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g265 i0 92.081 0.992295839753467 644 50 99 1 6 649 7108 6466 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 644 909 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
9366346 9366346 PRJNA446034_S_NODE_86968_length_160_cov_18.926829_g86931_i0 PRJNA446034 86968 160 18.926829 30.2829264 Potexvirus pepini 3433856 Viruses Viruses 296 5.55e-76   NTclustered gi|2675378618|gb|PP116314.1| 112229 g86931 i0 100 88.925 160 0 100 0 1 160 6212 6371 MAG: Pepino mosaic virus isolate 7452_PepMV, complete genome blastn 14228 296 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
10642112 10642112 PRJNA446034_S_NODE_41489_length_191_cov_8.727273_g41452_i0 PRJNA446034 41489 191 8.727273 16.66909143 Tobamovirus plantagonis 3432885 Viruses Viruses 331 1.88e-86   NTclustered gi|395863865|gb|JQ319720.1| 51680 g41452 i0 97.906 41.130890052356 191 4 100 0 1 191 5103 4913 Ribgrass mosaic virus strain FSHS isolate U597, complete genome blastn 7856 331 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus plantagonis
13191672 13191672 PRJNA446034_S_NODE_1451_length_413_cov_20.470745_g1414_i0 PRJNA446034 1451 413 20.470745 84.54417685 Potexvirus trifolii 3433859 Viruses Viruses 418 3.4e-112   NTclustered gi|1843793423|gb|MN399742.1| 12188 g1414 i0 96.825 19.043583535109 252 5 88 2 2 251 2623 2873 White clover mosaic virus isolate Kreis Stormarn_18 RNA replication protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 7865 418 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
15740684 15740684 PRJNA446034_S_NODE_14613_length_241_cov_8.225490_g14576_i0 PRJNA446034 14613 241 8.22549 19.8234309 Tobamovirus plantagonis 3432885 Viruses Viruses 390 4.05e-104   NTclustered gi|256692854|gb|GQ401365.1| 51680 g14576 i0 96.983 29.6597510373444 232 7 96 0 9 240 5512 5281 Ribgrass mosaic virus strain RMV Actinidia-AC isolate M2/A4, complete genome blastn 7148 390 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus plantagonis
19563996 19563996 PRJNA446034_S_NODE_3276_length_337_cov_27.743333_g3239_i0 PRJNA446034 3276 337 27.743333 93.49503221 Botourmiaviridae sp. 2808997 Viruses Viruses 82.4 4.06e-11   NTclustered gi|2396039641|gb|ON812892.1| 2808997 g3239 i0 94.444 3.58753709198813 54 2 16 1 260 313 2196 2248 MAG: Botourmiaviridae sp. isolate TIGMIC_1, complete genome blastn 1209 82.4 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
21493818 21493818 PRJNA446034_S_NODE_5997_length_294_cov_29.805447_g5960_i0 PRJNA446034 5997 294 29.805447 87.62801418 Viruses 10239 Viruses Viruses 62.1 4.53e-5   NTclustered gi|2565362283|emb|OY635503.1| 2697049 g5960 i0 100 11.3571428571429 33 0 11 0 1 33 2241 2209 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3339 62.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23390245 23390245 PRJNA446034_S_NODE_115699_length_150_cov_1.982301_g115662_i0 PRJNA446034 115699 150 1.982301 2.9734515 Hobart nepovirus 2 2201293 Viruses Viruses 243 6.75e-60   NTclustered gi|1390040509|gb|MG995735.1| 2201293 g115662 i0 96.599 0.98 147 4 98 1 4 150 5575 5720 Hobart nepovirus 2 isolate TAS-3 nonstructural polyprotein gene, partial cds blastn 147 243 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Hobart nepovirus 2
28844338 28844338 PRJNA446034_S_NODE_82468_length_163_cov_1.253968_g82431_i0 PRJNA446034 82468 163 1.253968 2.04396784 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 68.6 1e-11   NR AVM87439.1 3063761 g82431 i0 59.3 0.993865030674847 54 22 99.4 0 2 163 967 1020 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 162 68.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
32825678 32825678 PRJNA446034_S_NODE_27840_length_210_cov_2.364162_g27803_i0 PRJNA446034 27840 210 2.364162 4.9647402 Tongren Botou tick virus 1 2972060 Viruses Viruses 104 5.09e-24   NR UYL95439.1 2972060 g27803 i0 72.1 0.971428571428571 68 19 97.1 0 210 7 573 640 UYL95439.1 MAG: RNA-dependent RNA polymerase [Tongren Botou tick virus 1] diamond 204 104 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Tongren Botou tick virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;