RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA446034", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 5 ✖

tax_kingdom 1

  • Metazoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA446034 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26871189 26871189 PRJNA446034_S_NODE_48261_length_185_cov_2.797297_g48224_i0 PRJNA446034 48261 185 2.797297 5.17499945 Eurotatoria 2816136 Rotifera other_Eukaryota 68.9 9.89e-13   NR CAF0934208.1 249248 g48224 i0 100 1.60540540540541 33 0 53.5 0 2 100 130 162 CAF0934208.1 unnamed protein product [Adineta ricciae] diamond 297 68.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27518419 27518419 PRJNA446034_S_NODE_14963_length_240_cov_4.571429_g14926_i0 PRJNA446034 14963 240 4.571429 10.9714296 Adineta ricciae 249248 Rotifera other_Eukaryota 45.4 0.00414   NR CAF1545313.1 249248 g14926 i0 33.3 2.725 72 48 90 0 231 16 508 579 CAF1545313.1 unnamed protein product [Adineta ricciae] diamond 654 45.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27613274 27613274 PRJNA446034_S_NODE_113624_length_150_cov_8.902655_g113587_i0 PRJNA446034 113624 150 8.902655 13.3539825 Rotaria sordida 392033 Rotifera other_Eukaryota 68.6 8e-12   NR CAF1313708.1 392033 g113587 i0 68.1 1.9 47 15 94 0 6 146 85 131 CAF1313708.1 unnamed protein product [Rotaria sordida] diamond 285 68.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
29570601 29570601 PRJNA446034_S_NODE_80330_length_164_cov_1.488189_g80293_i0 PRJNA446034 80330 164 1.488189 2.44062996 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 41.2 0.0426   NR CAF1109261.1 1234261 g80293 i0 57.1 0.98780487804878 28 12 51.2 0 69 152 146 173 CAF1109261.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 162 41.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30265911 30265911 PRJNA446034_S_NODE_75172_length_166_cov_5.868217_g75135_i0 PRJNA446034 75172 166 5.868217 9.74124022 Adineta vaga 104782 Rotifera other_Eukaryota 90.1 7.75e-20   NR UJR24876.1 104782 g75135 i0 77.8 3.9578313253012 54 12 97.6 0 166 5 209 262 UJR24876.1 hypothetical protein I4U23_006245 [Adineta vaga] diamond 657 90.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;