RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA446034", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA446034 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27613284 27613284 PRJNA446034_S_NODE_53984_length_180_cov_3.832168_g53947_i0 PRJNA446034 53984 180 3.832168 6.8979024 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 42.4 0.021   NR GJQ43780.1 2651163 g53947 i0 37.9 1.86666666666667 58 35 96.7 1 175 2 120 176 GJQ43780.1 MAG: site-specific DNA-methyltransferase (adenine-specific) [Ignavibacteriaceae bacterium] diamond 336 42.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
29934529 29934529 PRJNA446034_S_NODE_291_length_644_cov_4.609555_g271_i0 PRJNA446034 291 644 4.609555 29.6855342 Bacteria 2 Bacteria Bacteria 53.9 1.28e-4   NR OYV85891.1 1970532 g271 i0 40.7 0.843167701863354 54 32 25.2 0 632 471 259 312 OYV85891.1 MAG: hypothetical protein B7Z63_04815, partial [Ignavibacteriae bacterium 37-53-5] diamond 543 53.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriae bacterium 37-53-5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;