RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA446034", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA446034 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27676526 27676526 PRJNA446034_S_NODE_80224_length_164_cov_1.740157_g80187_i0 PRJNA446034 80224 164 1.740157 2.85385748 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 101 7.42e-25   NR MBN9393937.1 2052166 g80187 i0 100 0.896341463414634 49 0 89.6 0 162 16 67 115 MBN9393937.1 histidine phosphatase family protein [Candidatus Melainabacteria bacterium] diamond 147 101 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
28212755 28212755 PRJNA446034_S_NODE_100486_length_155_cov_2.788136_g100449_i0 PRJNA446034 100486 155 2.788136 4.3216108 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 56.6 1.23e-7   NR MBX9573338.1 2364082 g100449 i0 51 0.948387096774194 49 23 94.8 1 2 148 213 260 MBX9573338.1 patatin-like phospholipase family protein [Candidatus Obscuribacterales bacterium] diamond 147 56.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29065633 29065633 PRJNA446034_S_NODE_24268_length_216_cov_4.055866_g24231_i0 PRJNA446034 24268 216 4.055866 8.76067056 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 121 2.07e-33   NR MBX9672597.1 2364082 g24231 i0 93.9 0.916666666666667 66 4 91.7 0 3 200 28 93 MBX9672597.1 helix-turn-helix transcriptional regulator [Candidatus Obscuribacterales bacterium] diamond 198 121 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29633463 29633463 PRJNA446034_S_NODE_83530_length_162_cov_3.520000_g83493_i0 PRJNA446034 83530 162 3.52 5.7024 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 113 7.14e-28   NR MBX9671877.1 2364082 g83493 i0 98.1 1 54 1 100 0 162 1 311 364 MBX9671877.1 GTP-binding protein [Candidatus Obscuribacterales bacterium] diamond 162 113 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;