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contig_metadata

14 rows where bioproject = "PRJNA438687" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA438687 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
435257 435257 PRJNA438687_S_NODE_1501_length_333_cov_19.667785_g1411_i0 PRJNA438687 1501 333 19.667785 65.49372405 Glomus sp. MUCL 43204 299378 Fungi Fungi 237 8.07e-58   NTclustered gi|121488347|emb|AJ854599.1| 299378 g1411 i0 90.217 55.1681681681682 184 15 55 2 150 333 865 1045 Glomus sp. MUCL 43204 28S rRNA gene, strain MUCL 43204, clone 8 blastn 18371 237 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Glomus Glomus sp. MUCL 43204
435301 435301 PRJNA438687_S_NODE_3321_length_244_cov_17.081340_g3231_i0 PRJNA438687 3321 244 17.08134 41.6784696 Lichtheimia corymbifera 42458 Fungi Fungi 198 2.67e-46   NTclustered gi|225131089|gb|FJ345350.1| 42458 g3231 i0 82.192 96.9959016393443 219 37 90 2 1 219 3434 3218 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 23667 198 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
435393 435393 PRJNA438687_S_NODE_801_length_401_cov_5.002732_g712_i0 PRJNA438687 801 401 5.002732 20.06095532 Lichtheimia corymbifera 42458 Fungi Fungi 58.4 8.26e-4   NTclustered gi|225131089|gb|FJ345350.1| 42458 g712 i0 100 2.03491271820449 31 0 8 0 144 174 2256 2226 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 816 58.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
1710140 1710140 PRJNA438687_S_NODE_262_length_560_cov_16.838095_g191_i0 PRJNA438687 262 560 16.838095 94.293332 Diversispora versiformis 1963269 Fungi Fungi 108 1.16e-18   NTclustered gi|56791308|gb|AY842573.1| 1963269 g191 i0 86.735 8.4 98 11 17 2 304 400 272 368 Glomus versiforme clone LSU1 large subunit ribosomal RNA gene, partial sequence blastn 4704 108 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora versiformis
4919327 4919327 PRJNA438687_S_NODE_3484_length_238_cov_8.610837_g3394_i0 PRJNA438687 3484 238 8.610837 20.49379206 root 1 Root_unresolved Root_unresolved 254 5.46e-63   NTclustered gi|530339809|gb|KC666029.1| 4874 g3394 i0 86.9 99.0672268907563 229 27 95 3 1 226 564 336 Gigaspora margarita isolate WDG47 18S ribosomal RNA gene, partial sequence blastn 23578 255 0.996078431372549 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
8744127 8744127 PRJNA438687_S_NODE_2467_length_281_cov_151.317073_g2377_i0 PRJNA438687 2467 281 151.317073 425.20097513 Fungi 4751 Fungi Fungi 490 4.63e-134   NTclustered gi|658131632|emb|HF968958.1| 4874 g2377 i0 98.214 149.822064056939 280 5 99 0 2 281 2274 1995 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 42100 490 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
10639171 10639171 PRJNA438687_S_NODE_3329_length_244_cov_2.755981_g3239_i0 PRJNA438687 3329 244 2.755981 6.72459364 Paraglomus occultum 144539 Fungi Fungi 91.6 4.66e-14   NTclustered gi|311235552|ref|NG_027567.1| 144539 g3239 i0 79.839 9.75409836065574 124 25 51 0 6 129 1832 1709 Paraglomus occultum INVAM IA702 28S rRNA gene, partial sequence; from reference material blastn 2380 91.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus occultum
17668841 17668841 PRJNA438687_S_NODE_2274_length_292_cov_8.307393_g2184_i0 PRJNA438687 2274 292 8.307393 24.25758756 Sphaerocreas 1237931 Fungi Fungi 167 9.26e-37   NTclustered gi|328541427|gb|JF414234.1| 994360 g2184 i0 96.97 33.0068493150685 99 3 34 0 1 99 10 108 Mucoromycotina sp. MIB 8349 voucher M.I. Bidartondo:8349 clone 1 18S ribosomal RNA gene, partial sequence blastn 9638 167 1 Eukaryota Opisthokonta Fungi Mucoromycota Endogonomycetes Endogonales Densosporaceae   Mucoromycotina sp. MIB 8349
19561237 19561237 PRJNA438687_S_NODE_4576_length_207_cov_9.325581_g4486_i0 PRJNA438687 4576 207 9.325581 19.30395267 Rhizomucor miehei 4839 Fungi Fungi 239 1.2999999999999999e-58   NTclustered gi|225134684|gb|FJ345356.1| 4839 g4486 i0 87.923 156.642512077295 207 19 99 4 1 206 3261 3462 Rhizomucor miehei strain ATCC 46345 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 32425 239 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor miehei
20836953 20836953 PRJNA438687_S_NODE_737_length_412_cov_4.885942_g648_i0 PRJNA438687 737 412 4.885942 20.13008104 Lichtheimia corymbifera 42458 Fungi Fungi 185 3.7399999999999997e-42   NTclustered gi|225131089|gb|FJ345350.1| 42458 g648 i0 85.393 43.5436893203884 178 26 43 0 61 238 3387 3210 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17940 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
24043017 24043017 PRJNA438687_S_NODE_2679_length_272_cov_50.789030_g2589_i0 PRJNA438687 2679 272 50.78903 138.1461616 Fungi 4751 Fungi Fungi 368 2.18e-97   NTclustered gi|658131632|emb|HF968958.1| 4874 g2589 i0 91.176 67.1985294117647 272 22 99 2 2 272 2274 2004 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 18278 368 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
24661621 24661621 PRJNA438687_S_NODE_760_length_408_cov_4.150134_g671_i0 PRJNA438687 760 408 4.150134 16.93254672 Lichtheimia corymbifera 42458 Fungi Fungi 185 3.7e-42   NTclustered gi|225131089|gb|FJ345350.1| 42458 g671 i0 85.393 43.9705882352941 178 26 44 0 61 238 3387 3210 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17940 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
26632825 26632825 PRJNA438687_S_NODE_1941_length_309_cov_5.879562_g1851_i0 PRJNA438687 1941 309 5.879562 18.16784658 Zychaea mexicana 64656 Fungi Fungi 60.5 1.26e-8   NR XP_052974654.1 64656 g1851 i0 61.4 0.805825242718447 44 17 42.7 0 13 144 23 66 XP_052974654.1 uncharacterized protein BDB00DRAFT_877453 [Zychaea mexicana] diamond 249 60.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
29681359 29681359 PRJNA438687_S_NODE_7490_length_158_cov_2.284553_g7400_i0 PRJNA438687 7490 158 2.284553 3.60959374 root 1 Root_unresolved Root_unresolved 44.7 0.00243   NR KAG9298475.1 50956 g7400 i0 84 1.10126582278481 25 4 47.5 0 149 75 250 274 KAG9298475.1 hypothetical protein G9A89_000557, partial [Geosiphon pyriformis] diamond 174 44.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Geosiphonaceae Geosiphon Geosiphon pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;