RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where bioproject = "PRJNA438687", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 10 ✖

tax_kingdom 1

  • Orthornavirae · 10 ✖

bioproject 1

  • PRJNA438687 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2986033 2986033 PRJNA438687_S_NODE_6043_length_178_cov_6.741259_g5953_i0 PRJNA438687 6043 178 6.741259 11.99944102 Sopidub virus 3131684 Viruses Viruses 100 5.3e-17   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g5953 i0 90.789 1.52808988764045 76 6 43 1 5 80 2212 2138 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 272 100 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus
2986072 2986072 PRJNA438687_S_NODE_8123_length_151_cov_2.086207_g8033_i0 PRJNA438687 8123 151 2.086207 3.15017257 Sobemovirus sp. 2809869 Viruses Viruses 182 1.51e-41   NTclustered gi|2171144996|gb|MZ218234.1| 2809869 g8033 i0 94.118 78.1523178807947 119 7 79 0 33 151 4524 4406 MAG: Sobemovirus sp. isolate R90-k141_286143 genomic sequence blastn 11801 182 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus sp.
5538983 5538983 PRJNA438687_S_NODE_3245_length_248_cov_2.751174_g3155_i0 PRJNA438687 3245 248 2.751174 6.82291152 Sobemovirus CNMOV 3432495 Viruses Viruses 451 1.89e-122   NTclustered gi|2575892443|gb|OR238492.1| 2931826 g3155 i0 99.595 7.96774193548387 247 1 99 0 2 248 608 362 Cynosurus mottle virus isolate Schladen, complete genome blastn 1976 451 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus CNMOV
6813130 6813130 PRJNA438687_S_NODE_6686_length_169_cov_1.365672_g6596_i0 PRJNA438687 6686 169 1.365672 2.30798568 Sopidub virus 3131684 Viruses Viruses 80.5 6.47e-11   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g6596 i0 87.5 0.958579881656805 72 5 40 4 95 162 2139 2210 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 162 80.5 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus
9363376 9363376 PRJNA438687_S_NODE_6448_length_172_cov_3.620438_g6358_i0 PRJNA438687 6448 172 3.620438 6.22715336 Mute swan feces associated sobemovirus 1 2832221 Viruses Viruses 313 5.989999999999998e-81   NTclustered gi|2032489095|gb|MW588173.1| 2832221 g6358 i0 99.419 10.8662790697674 172 1 100 0 1 172 2147 1976 Mute swan feces associated sobemovirus 1 strain Abbotsbury/A/2016 polyprotein P2a, polyprotein 2b, and capsid protein genes, complete cds blastn 1869 313 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Mute swan feces associated sobemovirus 1
10639118 10639118 PRJNA438687_S_NODE_1009_length_378_cov_1.618076_g920_i0 PRJNA438687 1009 378 1.618076 6.11632728 Mute swan feces associated sobemovirus 1 2832221 Viruses Viruses 671 0   NTclustered gi|2032489095|gb|MW588173.1| 2832221 g920 i0 98.681 8.02116402116402 379 4 100 1 1 378 1505 1127 Mute swan feces associated sobemovirus 1 strain Abbotsbury/A/2016 polyprotein P2a, polyprotein 2b, and capsid protein genes, complete cds blastn 3032 671 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Mute swan feces associated sobemovirus 1
13188994 13188994 PRJNA438687_S_NODE_4131_length_218_cov_4.535519_g4041_i0 PRJNA438687 4131 218 4.535519 9.88743142 Sobemovirus CNMOV 3432495 Viruses Viruses 381 2.1599999999999994e-101   NTclustered gi|2575892419|gb|OR238488.1| 2931826 g4041 i0 98.174 10.894495412844 219 3 100 1 1 218 2477 2695 Cynosurus mottle virus isolate CV-104, complete genome blastn 2375 381 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus CNMOV
18942709 18942709 PRJNA438687_S_NODE_7795_length_155_cov_1.333333_g7705_i0 PRJNA438687 7795 155 1.333333 2.06666615 Sobemovirus 12137 Viruses Viruses 174 2.61e-39   NTclustered gi|2562620724|gb|OQ974933.1| 40979 g7705 i0 91.339 11.1354838709677 127 11 82 0 1 127 1843 1969 Cocksfoot mottle virus isolate CfMV_Est, complete genome blastn 1726 174 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus CFMV
28244400 28244400 PRJNA438687_S_NODE_7926_length_153_cov_3.186441_g7836_i0 PRJNA438687 7926 153 3.186441 4.87525473 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 73.6 1.51e-13   NR UNY42033.1 3003959 g7836 i0 64 2.94117647058824 50 18 98 0 1 150 928 977 UNY42033.1 MAG: polyprotein [Picornavirales sp.] diamond 450 73.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31862163 31862163 PRJNA438687_S_NODE_4677_length_205_cov_3.129412_g4587_i0 PRJNA438687 4677 205 3.129412 6.4152946 Viruses 10239 Viruses Viruses 103 6.179999999999999e-24   NR WPR18179.1 3062991 g4587 i0 63.1 2.89756097560976 65 24 95.1 0 9 203 461 525 WPR18179.1 MAG: capsid protein, partial [Crogonang virus 121] diamond 594 103 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 121

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;