RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA438687", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA438687 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4919412 4919412 PRJNA438687_S_NODE_8024_length_152_cov_2.145299_g7934_i0 PRJNA438687 8024 152 2.145299 3.26085448 Microsporidium 144516 Fungi Fungi 130 5.58e-26   NTclustered gi|2849943260|gb|PQ577808.1| 1844323 g7934 i0 83.333 72.4736842105263 144 21 93 3 5 146 512 654 Microsporidium sp. isolate IQN.1 small subunit ribosomal RNA gene, partial sequence blastn 11016 130 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp.
25317410 25317410 PRJNA438687_S_NODE_5820_length_183_cov_1.925676_g5730_i0 PRJNA438687 5820 183 1.925676 3.52398708 Microsporidium 144516 Fungi Fungi 339 1.07e-88   NTclustered gi|918463385|gb|KR871371.1| 1703217 g5730 i0 100 74.8251366120219 183 0 100 0 1 183 947 765 Microsporidium sp. I haplotype 1 small subunit ribosomal RNA gene, partial sequence blastn 13693 339 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. I

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;