RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA438687", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA438687 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4262306 4262306 PRJNA438687_S_NODE_3824_length_227_cov_23.515625_g3734_i0 PRJNA438687 3824 227 23.515625 53.38046875 Catenomyces persicinus 281913 Fungi Fungi 348 2.3e-91   NTclustered gi|82398336|gb|DQ273789.1| 281913 g3734 i0 94.667 99.1541850220264 225 11 99 1 1 225 1773 1996 Catenomyces sp. JEL342 isolate AFTOL-ID 47 28S ribosomal RNA gene, partial sequence blastn 22508 348 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenomyces Catenomyces persicinus
13188955 13188955 PRJNA438687_S_NODE_2391_length_286_cov_58.569721_g2301_i0 PRJNA438687 2391 286 58.569721 167.50940206 Catenomyces persicinus 281913 Fungi Fungi 451 2.23e-122   NTclustered gi|82398336|gb|DQ273789.1| 281913 g2301 i0 95.105 99.2587412587413 286 14 100 0 1 286 1542 1827 Catenomyces sp. JEL342 isolate AFTOL-ID 47 28S ribosomal RNA gene, partial sequence blastn 28388 451 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenomyces Catenomyces persicinus
23387471 23387471 PRJNA438687_S_NODE_2539_length_278_cov_56.074074_g2449_i0 PRJNA438687 2539 278 56.074074 155.88592572 Catenomyces persicinus 281913 Fungi Fungi 468 2.14e-127   NTclustered gi|82398336|gb|DQ273789.1| 281913 g2449 i0 97.112 86.7697841726619 277 8 99 0 2 278 2304 2028 Catenomyces sp. JEL342 isolate AFTOL-ID 47 28S ribosomal RNA gene, partial sequence blastn 24122 468 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenomyces Catenomyces persicinus
24661526 24661526 PRJNA438687_S_NODE_2540_length_278_cov_52.341564_g2450_i0 PRJNA438687 2540 278 52.341564 145.50954792 Catenomyces persicinus 281913 Fungi Fungi 473 4.6099999999999987e-129   NTclustered gi|82398336|gb|DQ273789.1| 281913 g2450 i0 97.473 88.9136690647482 277 7 99 0 2 278 2304 2028 Catenomyces sp. JEL342 isolate AFTOL-ID 47 28S ribosomal RNA gene, partial sequence blastn 24718 473 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenomyces Catenomyces persicinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;