RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA438687", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA438687 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8088564 8088564 PRJNA438687_S_NODE_6387_length_173_cov_9.311594_g6297_i0 PRJNA438687 6387 173 9.311594 16.10905762 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 172 1.07e-38   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g6297 i0 91.339 265.768786127168 127 10 73 1 48 173 3682049 3682175 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 45978 172 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
15737979 15737979 PRJNA438687_S_NODE_4733_length_204_cov_1.544379_g4643_i0 PRJNA438687 4733 204 1.544379 3.15053316 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 145 2.85e-30   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g4643 i0 82.022 61.343137254902 178 25 86 7 29 203 595858 596031 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 12514 145 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
20836935 20836935 PRJNA438687_S_NODE_6457_length_172_cov_2.635036_g6367_i0 PRJNA438687 6457 172 2.635036 4.53226192 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 204 3.76e-48   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g6367 i0 92.857 119.593023255814 140 10 81 0 5 144 597463 597324 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 20570 204 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
20836950 20836950 PRJNA438687_S_NODE_7177_length_162_cov_2.740157_g7087_i0 PRJNA438687 7177 162 2.740157 4.43905434 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 231 1.6099999999999998e-56   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g7087 i0 94.079 107.135802469136 152 9 94 0 11 162 596618 596769 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 17356 231 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;