RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA438687" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 2 ✖

bioproject 1

  • PRJNA438687 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10639206 10639206 PRJNA438687_S_NODE_4689_length_205_cov_1.641176_g4599_i0 PRJNA438687 4689 205 1.641176 3.3644108 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 220 4.64e-53   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g4599 i0 86.341 46.8829268292683 205 25 99 3 1 203 3495967 3496170 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 9611 220 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
20836889 20836889 PRJNA438687_S_NODE_4217_length_216_cov_1.961326_g4127_i0 PRJNA438687 4217 216 1.961326 4.23646416 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 200 6.429999999999999e-47   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g4127 i0 83.71 9.18518518518519 221 26 100 9 1 216 3495740 3495955 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 1984 200 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;