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contig_metadata

18 rows where bioproject = "PRJNA438687", tax_clade = "CRuMs" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 18 ✖

tax_clade 1

  • CRuMs · 18 ✖

bioproject 1

  • PRJNA438687 · 18 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
435247 435247 PRJNA438687_S_NODE_1201_length_358_cov_4.445820_g1111_i0 PRJNA438687 1201 358 4.44582 15.9160356 Rigifila ramosa 1122280 Root_unresolved Root_unresolved 147 1.51e-30   NTclustered gi|390124886|dbj|AB686266.1| 1122280 g1111 i0 88 17.9804469273743 125 13 34 2 236 358 711 835 Rigifila ramosa gene for small subunit ribosomal RNA, partial sequence, strain: YPF923 blastn 6437 147 1 Eukaryota CRuMs       Rigifilida   Rigifila Rigifila ramosa
435377 435377 PRJNA438687_S_NODE_6941_length_165_cov_4.161538_g6851_i0 PRJNA438687 6941 165 4.161538 6.8665377 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 292 7.47e-75   NTclustered gi|300078503|gb|GU001165.1| 238746 g6851 i0 99.379 57.8121212121212 161 1 98 0 1 161 2376 2536 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9539 292 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
1710192 1710192 PRJNA438687_S_NODE_4762_length_203_cov_15.958333_g4672_i0 PRJNA438687 4762 203 15.958333 32.39541599 Rigifila ramosa 1122280 Root_unresolved Root_unresolved 73.1 1.36e-8   NTclustered gi|390124887|dbj|AB686267.1| 1122280 g4672 i0 88.333 0.295566502463054 60 7 30 0 144 203 1415 1474 Rigifila ramosa gene for large subunit ribosomal RNA, partial sequence, strain: YPF923 blastn 60 73.1 1 Eukaryota CRuMs       Rigifilida   Rigifila Rigifila ramosa
2985991 2985991 PRJNA438687_S_NODE_3803_length_228_cov_4.186528_g3713_i0 PRJNA438687 3803 228 4.186528 9.54528384 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 372 1.37e-98   NTclustered gi|300078503|gb|GU001165.1| 238746 g3713 i0 97.653 34.1578947368421 213 5 93 0 1 213 4220 4432 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7788 372 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
4262343 4262343 PRJNA438687_S_NODE_5444_length_189_cov_4.051948_g5354_i0 PRJNA438687 5444 189 4.051948 7.65818172 Rigifila ramosa 1122280 Root_unresolved Root_unresolved 219 1.51e-52   NTclustered gi|390124887|dbj|AB686267.1| 1122280 g5354 i0 87.895 63.3386243386243 190 17 100 4 1 189 1149 965 Rigifila ramosa gene for large subunit ribosomal RNA, partial sequence, strain: YPF923 blastn 11971 219 1 Eukaryota CRuMs       Rigifilida   Rigifila Rigifila ramosa
5538939 5538939 PRJNA438687_S_NODE_1405_length_340_cov_39.416393_g1315_i0 PRJNA438687 1405 340 39.416393 134.0157362 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 538 2.0199999999999992e-148   NTclustered gi|300078503|gb|GU001165.1| 238746 g1315 i0 95.308 59.9941176470588 341 12 99 2 1 339 2990 3328 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20398 538 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
6813049 6813049 PRJNA438687_S_NODE_286_length_546_cov_22.906067_g212_i0 PRJNA438687 286 546 22.906067 125.06712582 Rigifila ramosa 1122280 Root_unresolved Root_unresolved 291 1.05e-73   NTclustered gi|390124887|dbj|AB686267.1| 1122280 g212 i0 92.233 36.8113553113553 206 14 71 1 242 445 1661 1866 Rigifila ramosa gene for large subunit ribosomal RNA, partial sequence, strain: YPF923 blastn 20099 291 1 Eukaryota CRuMs       Rigifilida   Rigifila Rigifila ramosa
8088488 8088488 PRJNA438687_S_NODE_2707_length_271_cov_6.656780_g2617_i0 PRJNA438687 2707 271 6.65678 18.0398738 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 189 1.8199999999999998e-43   NTclustered gi|300078503|gb|GU001165.1| 238746 g2617 i0 79.71 69.3616236162362 276 45 98 7 6 271 1327 1053 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18797 189 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
8088563 8088563 PRJNA438687_S_NODE_6307_length_174_cov_41.395683_g6217_i0 PRJNA438687 6307 174 41.395683 72.02848842 uncultured Micronuclearia 1595896 Root_unresolved Root_unresolved 254 3.74e-63   NTclustered gi|1516250890|gb|MK177607.1| 1595896 g6217 i0 94.512 95.6149425287356 164 9 94 0 1 164 916 1079 Uncultured Micronuclearia clone DDI50.fa small subunit ribosomal RNA gene, partial sequence blastn 16637 254 1 Eukaryota CRuMs       Rigifilida   Micronuclearia uncultured Micronuclearia
10639242 10639242 PRJNA438687_S_NODE_6429_length_172_cov_45.350365_g6339_i0 PRJNA438687 6429 172 45.350365 78.0026278 uncultured Micronuclearia 1595896 Root_unresolved Root_unresolved 272 1.02e-68   NTclustered gi|1516250890|gb|MK177607.1| 1595896 g6339 i0 96.914 95.4941860465116 162 5 94 0 1 162 918 1079 Uncultured Micronuclearia clone DDI50.fa small subunit ribosomal RNA gene, partial sequence blastn 16425 272 1 Eukaryota CRuMs       Rigifilida   Micronuclearia uncultured Micronuclearia
14464010 14464010 PRJNA438687_S_NODE_5092_length_196_cov_39.819876_g5002_i0 PRJNA438687 5092 196 39.819876 78.04695696 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 316 5.45e-82   NTclustered gi|33641921|gb|AY268038.1| 238746 g5002 i0 97.312 95.1173469387755 186 5 95 0 11 196 1123 938 Micronuclearia podoventralis small subunit ribosomal RNA gene, partial sequence blastn 18643 316 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
18287006 18287006 PRJNA438687_S_NODE_6195_length_176_cov_6.652482_g6105_i0 PRJNA438687 6195 176 6.652482 11.70836832 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 320 3.69e-83   NTclustered gi|300078503|gb|GU001165.1| 238746 g6105 i0 99.432 63.5284090909091 176 1 100 0 1 176 3724 3549 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11181 320 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
18287027 18287027 PRJNA438687_S_NODE_735_length_412_cov_10.244032_g646_i0 PRJNA438687 735 412 10.244032 42.20541184 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 604 2.4199999999999993e-168   NTclustered gi|300078503|gb|GU001165.1| 238746 g646 i0 93.237 88.4563106796116 414 23 100 5 1 412 2980 2570 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36444 604 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
19561200 19561200 PRJNA438687_S_NODE_2876_length_263_cov_11.969298_g2786_i0 PRJNA438687 2876 263 11.969298 31.47925374 Rigifila ramosa 1122280 Root_unresolved Root_unresolved 209 1.35e-49   NTclustered gi|390124887|dbj|AB686267.1| 1122280 g2786 i0 94.815 49.4942965779468 135 5 51 1 131 263 2666 2532 Rigifila ramosa gene for large subunit ribosomal RNA, partial sequence, strain: YPF923 blastn 13017 209 1 Eukaryota CRuMs       Rigifilida   Rigifila Rigifila ramosa
20836844 20836844 PRJNA438687_S_NODE_2397_length_286_cov_11.832669_g2307_i0 PRJNA438687 2397 286 11.832669 33.84143334 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 457 4.79e-124   NTclustered gi|300078503|gb|GU001165.1| 238746 g2307 i0 96.071 99.2552447552448 280 11 98 0 7 286 2000 1721 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28387 457 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
20836959 20836959 PRJNA438687_S_NODE_7917_length_153_cov_6.805085_g7827_i0 PRJNA438687 7917 153 6.805085 10.41178005 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 235 1.16e-57   NTclustered gi|300078503|gb|GU001165.1| 238746 g7827 i0 94.702 104.78431372549 151 8 99 0 3 153 4080 4230 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16032 235 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis
22111922 22111922 PRJNA438687_S_NODE_2878_length_263_cov_6.609649_g2788_i0 PRJNA438687 2878 263 6.609649 17.38337687 Rigifila ramosa 1122280 Root_unresolved Root_unresolved 78.7 3.96e-10   NTclustered gi|390124887|dbj|AB686267.1| 1122280 g2788 i0 95.833 14.6844106463878 48 2 18 0 1 48 2256 2209 Rigifila ramosa gene for large subunit ribosomal RNA, partial sequence, strain: YPF923 blastn 3862 78.7 1 Eukaryota CRuMs       Rigifilida   Rigifila Rigifila ramosa
22111972 22111972 PRJNA438687_S_NODE_5138_length_195_cov_10.775000_g5048_i0 PRJNA438687 5138 195 10.775 21.01125 Micronuclearia podoventralis 238746 Root_unresolved Root_unresolved 231 2.02e-56   NTclustered gi|300078503|gb|GU001165.1| 238746 g5048 i0 88.144 127.071794871795 194 23 99 0 1 194 3526 3719 Micronuclearia podoventralis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24779 231 1 Eukaryota CRuMs       Rigifilida   Micronuclearia Micronuclearia podoventralis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;