contig_metadata
8 rows where bioproject = "PRJNA438572" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13844610 | 13844610 | PRJNA438572_P_NODE_3851_length_502_cov_2.361305_g3733_i0 | PRJNA438572 | 3851 | 502 | 2.361305 | 11.8537511 | Spirochaeta | 146 | Bacteria | Bacteria | 580 | 5.0599999999999986e-161 | NTclustered | gi|507148391|ref|NR_103194.1| | 46355 | g3733 | i0 | 87.5 | 204.609561752988 | 504 | 61 | 100 | 2 | 1 | 502 | 1219 | 716 | Spirochaeta africana strain Z-7692 23S ribosomal RNA gene, complete sequence | blastn | 102714 | 580 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta africana | ||
| 18286827 | 18286827 | PRJNA438572_P_NODE_7195_length_376_cov_2.290429_g7076_i0 | PRJNA438572 | 7195 | 376 | 2.290429 | 8.61201304 | Salinispira pacifica | 1307761 | Bacteria | Bacteria | 333 | 1.14e-86 | NTclustered | gi|565679415|gb|CP006939.1| | 1307761 | g7076 | i0 | 84.393 | 101.281914893617 | 346 | 47 | 92 | 3 | 1 | 346 | 385292 | 385630 | Salinispira pacifica strain L21-RPul-D2, complete genome | blastn | 38082 | 333 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Salinispira | Salinispira pacifica | ||
| 22111661 | 22111661 | PRJNA438572_P_NODE_21058_length_247_cov_0.896552_g20939_i0 | PRJNA438572 | 21058 | 247 | 0.896552 | 2.21448344 | Treponema vincentii | 69710 | Bacteria | Bacteria | 257 | 4.41e-64 | NTclustered | gi|2034589463|gb|CP050497.1| | 69710 | g20939 | i0 | 85.425 | 7 | 247 | 36 | 100 | 0 | 1 | 247 | 2581868 | 2582114 | Treponema vincentii strain OMZ 806 chromosome, complete genome | blastn | 1729 | 257 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 27092307 | 27092307 | PRJNA438572_P_NODE_12822_length_289_cov_0.879630_g12703_i0 | PRJNA438572 | 12822 | 289 | 0.87963 | 2.5421307 | Bacteria | 2 | Bacteria | Bacteria | 79.7 | 9.770000000000001e-16 | NR | MDD7201844.1 | 2026792 | g12703 | i0 | 43 | 1.94117647058824 | 93 | 53 | 96.5 | 0 | 1 | 279 | 39 | 131 | MDD7201844.1 SIMPL domain-containing protein [Spirochaetales bacterium] | diamond | 561 | 79.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetales bacterium | ||||
| 27234067 | 27234067 | PRJNA438572_P_NODE_9763_length_327_cov_1.838583_g9644_i0 | PRJNA438572 | 9763 | 327 | 1.838583 | 6.01216641 | Rectinemataceae bacterium | 3064674 | Bacteria | Bacteria | 46.2 | 0.00508 | NR | MDP2816068.1 | 3064674 | g9644 | i0 | 37.6 | 0.853211009174312 | 93 | 46 | 81.7 | 3 | 5 | 271 | 10 | 94 | MDP2816068.1 hypothetical protein [Rectinemataceae bacterium] | diamond | 279 | 46.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Rectinemataceae | Rectinemataceae bacterium | |||
| 28402442 | 28402442 | PRJNA438572_P_NODE_2966_length_570_cov_1.096579_g2848_i0 | PRJNA438572 | 2966 | 570 | 1.096579 | 6.2505003 | Spirochaetaceae bacterium | 1898206 | Bacteria | Bacteria | 45.8 | 0.0468 | NR | MBK5201917.1 | 1898206 | g2848 | i0 | 49.1 | 0.278947368421053 | 53 | 22 | 27.9 | 1 | 432 | 274 | 148 | 195 | MBK5201917.1 L-lactate dehydrogenase [Spirochaetaceae bacterium] | diamond | 159 | 45.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaetaceae bacterium | |||
| 29696582 | 29696582 | PRJNA438572_P_NODE_20650_length_247_cov_1.810345_g20531_i0 | PRJNA438572 | 20650 | 247 | 1.810345 | 4.47155215 | Treponema sp. | 166 | Bacteria | Bacteria | 45.8 | 0.00182 | NR | MBD5443786.1 | 166 | g20531 | i0 | 54.8 | 1.23886639676113 | 31 | 14 | 37.7 | 0 | 121 | 29 | 121 | 151 | MBD5443786.1 CAP domain-containing protein [Treponema sp.] | diamond | 306 | 45.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 31972575 | 31972575 | PRJNA438572_P_NODE_8978_length_340_cov_1.745318_g8859_i0 | PRJNA438572 | 8978 | 340 | 1.745318 | 5.9340812 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 74.3 | 6.14e-14 | NR | HNO24933.1 | 2026757 | g8859 | i0 | 97.5 | 0.352941176470588 | 40 | 1 | 35.3 | 0 | 340 | 221 | 108 | 147 | HNO24933.1 Hsp70 family protein [Leptospiraceae bacterium] | diamond | 120 | 74.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;