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contig_metadata

31 rows where bioproject = "PRJNA438572" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA438572 · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
434970 434970 PRJNA438572_P_NODE_18961_length_250_cov_0.881356_g18842_i0 PRJNA438572 18961 250 0.881356 2.20339 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 52.8 0.023   NTclustered gi|2893358450|emb|OZ220742.1| 2651171 g18842 i0 100 0.112 28 0 11 0 199 226 2471547 2471574 MAG: Thermoanaerobaculia bacterium isolate 0db66e92-d31a-4200-8262-fff8455c21c0 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
5538739 5538739 PRJNA438572_P_NODE_21385_length_246_cov_0.901734_g21266_i0 PRJNA438572 21385 246 0.901734 2.21826564 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 449 6.74e-122   NTclustered gi|307713386|gb|HM438236.1| 194844 g21266 i0 99.595 99.8577235772358 247 0 100 1 1 246 288 42 Uncultured Acidobacteriaceae bacterium clone 3G10 16S ribosomal RNA gene, partial sequence blastn 24565 449 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
6812642 6812642 PRJNA438572_P_NODE_12126_length_295_cov_1.405405_g12007_i0 PRJNA438572 12126 295 1.405405 4.14594475 Acidobacteriota bacterium 1978231 Bacteria Bacteria 405 1.82e-108   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g12007 i0 91.497 126.064406779661 294 25 99 0 2 295 4649146 4649439 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 37189 405 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
9362877 9362877 PRJNA438572_P_NODE_1148_length_871_cov_1.385965_g1057_i0 PRJNA438572 1148 871 1.385965 12.07175515 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 457 1.5900000000000002e-123   NTclustered gi|2874253836|emb|OY969886.1| 171953 g1057 i0 77.11 422.787600459242 865 150 96 37 15 853 887672 888514 MAG: uncultured Acidobacteriota bacterium isolate MFD10007.bin.c.1 genome assembly, chromosome: 1 blastn 368248 457 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
15737586 15737586 PRJNA438572_P_NODE_15353_length_265_cov_2.302083_g15234_i0 PRJNA438572 15353 265 2.302083 6.10051995 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 228 3.7499999999999994e-55   NTclustered gi|2874253769|emb|OY969716.1| 171953 g15234 i0 85.714 189.354716981132 217 29 82 2 1 216 4154104 4154319 MAG: uncultured Acidobacteriota bacterium isolate MFD04540.bin.c.1 genome assembly, chromosome: 1 blastn 50179 228 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
18286554 18286554 PRJNA438572_P_NODE_13795_length_280_cov_1.130435_g13676_i0 PRJNA438572 13795 280 1.130435 3.165218 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 507 4.58e-139   NTclustered gi|339646627|gb|JN039016.1| 171953 g13676 i0 99.286 96.9857142857143 280 2 100 0 1 280 4 283 Uncultured Acidobacteria bacterium clone P-B296 16S ribosomal RNA gene, partial sequence blastn 27156 507 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
19560816 19560816 PRJNA438572_P_NODE_12796_length_289_cov_1.208333_g12677_i0 PRJNA438572 12796 289 1.208333 3.49208237 Acidobacteriota bacterium 1978231 Bacteria Bacteria 112 1.42e-26   NR MBP7779370.1 1978231 g12677 i0 60.4 0.944636678200692 91 30 88.2 1 289 35 99 189 MBP7779370.1 NAD(P)H-dependent oxidoreductase subunit E [Acidobacteriota bacterium] diamond 273 112 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26696038 26696038 PRJNA438572_P_NODE_5141_length_439_cov_1.199454_g5022_i0 PRJNA438572 5141 439 1.199454 5.26560306 Acidobacteriota bacterium 1978231 Bacteria Bacteria 116 1.07e-27   NR TDI13400.1 1978231 g5022 i0 48 0.669703872437358 98 51 67 0 21 314 324 421 TDI13400.1 MAG: M20/M25/M40 family metallo-hydrolase [Acidobacteriota bacterium] diamond 294 116 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27060672 27060672 PRJNA438572_P_NODE_17022_length_253_cov_0.866667_g16903_i0 PRJNA438572 17022 253 0.866667 2.19266751 Bacteria 2 Bacteria Bacteria 103 4.24e-24   NR PYS29125.1 1978231 g16903 i0 59.1 2.97628458498024 88 32 99.6 1 252 1 203 290 PYS29125.1 MAG: hypothetical protein DMF75_17775 [Acidobacteriota bacterium] diamond 753 104 0.990384615384615 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27075967 27075967 PRJNA438572_P_NODE_14762_length_271_cov_1.181818_g14643_i0 PRJNA438572 14762 271 1.181818 3.20272678 Acidobacteriota bacterium 1978231 Bacteria Bacteria 46.6 0.00236   NR MBN2242968.1 1978231 g14643 i0 46 0.553505535055351 50 27 55.4 0 234 85 330 379 MBN2242968.1 NAD-glutamate dehydrogenase [Acidobacteriota bacterium] diamond 150 46.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27613262 27613262 PRJNA438572_P_NODE_8264_length_354_cov_1.110320_g8145_i0 PRJNA438572 8264 354 1.11032 3.9305328 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 121 1.16e-30   NR HJQ31512.1 2283092 g8145 i0 71.1 9.4406779661017 76 22 64.4 0 2 229 240 315 HJQ31512.1 prolyl aminopeptidase [Pyrinomonadaceae bacterium] diamond 3342 121 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27661118 27661118 PRJNA438572_P_NODE_22844_length_244_cov_0.912281_g22725_i0 PRJNA438572 22844 244 0.912281 2.22596564 Pseudomonadati 3379134 Bacteria Bacteria 53.9 4.38e-6   NR MCM2316360.1 2651171 g22725 i0 40 3.9344262295082 75 41 91 2 222 1 161 232 MCM2316360.1 M4 family metallopeptidase [Thermoanaerobaculia bacterium] diamond 960 53.9 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28181182 28181182 PRJNA438572_P_NODE_4866_length_449_cov_2.090426_g4747_i0 PRJNA438572 4866 449 2.090426 9.38601274 Acidobacteriota bacterium 1978231 Bacteria Bacteria 94.7 5.81e-22   NR MDQ7008654.1 1978231 g4747 i0 85 0.400890868596882 60 8 40.1 1 449 270 53 111 MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] diamond 180 94.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28528894 28528894 PRJNA438572_P_NODE_10767_length_313_cov_1.233333_g10648_i0 PRJNA438572 10767 313 1.233333 3.86033229 Acidobacteriota bacterium 1978231 Bacteria Bacteria 68.6 3.08e-11   NR MEK7723144.1 1978231 g10648 i0 36.8 2.69329073482428 95 60 91.1 0 23 307 78 172 MEK7723144.1 CAP domain-containing protein [Acidobacteriota bacterium] diamond 843 68.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28781159 28781159 PRJNA438572_P_NODE_16787_length_253_cov_1.300000_g16668_i0 PRJNA438572 16787 253 1.3 3.289 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 69.7 1.04e-12   NR HEX6159026.1 2651171 g16668 i0 45.8 5.26482213438735 72 39 85.4 0 227 12 79 150 HEX6159026.1 NAD(P)-dependent oxidoreductase [Thermoanaerobaculia bacterium] diamond 1332 69.7 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28970821 28970821 PRJNA438572_P_NODE_18408_length_251_cov_0.876404_g18289_i0 PRJNA438572 18408 251 0.876404 2.19977404 Blastocatellia bacterium 2052146 Bacteria Bacteria 56.6 5.29e-7   NR HKP86800.1 2052146 g18289 i0 46.1 0.908366533864542 76 36 88.4 2 25 246 81 153 HKP86800.1 HYR domain-containing protein [Blastocatellia bacterium] diamond 228 56.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
29507459 29507459 PRJNA438572_P_NODE_16430_length_256_cov_1.278689_g16311_i0 PRJNA438572 16430 256 1.278689 3.27344384 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 45.4 0.00437   NR HKC62069.1 2283092 g16311 i0 39.2 1.86328125 79 44 90.2 3 237 7 79 155 HKC62069.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 477 45.4 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29507466 29507466 PRJNA438572_P_NODE_22410_length_245_cov_0.906977_g22291_i0 PRJNA438572 22410 245 0.906977 2.22209365 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 43.5 0.02   NR MEZ5354635.1 2212468 g22291 i0 38.1 0.514285714285714 42 26 51.4 0 64 189 41 82 MEZ5354635.1 MBOAT family O-acyltransferase [Bryobacteraceae bacterium] diamond 126 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
29696583 29696583 PRJNA438572_P_NODE_22550_length_245_cov_0.883721_g22431_i0 PRJNA438572 22550 245 0.883721 2.16511645 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 99 6.24e-22   NR HZH34808.1 2283092 g22431 i0 74.2 0.808163265306122 66 17 80.8 0 46 243 1 66 HZH34808.1 VCBS repeat-containing protein [Pyrinomonadaceae bacterium] diamond 198 99 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29791522 29791522 PRJNA438572_P_NODE_13711_length_280_cov_2.125604_g13592_i0 PRJNA438572 13711 280 2.125604 5.9516912 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 80.1 1.3e-15   NR HET6929111.1 3069120 g13592 i0 50 3.08571428571429 72 36 77.1 0 2 217 209 280 HET6929111.1 aldolase/citrate lyase family protein [Candidatus Acidiferrum sp.] diamond 864 80.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
29854921 29854921 PRJNA438572_P_NODE_2611_length_605_cov_5.894737_g2495_i0 PRJNA438572 2611 605 5.894737 35.66315885 Acidobacteriota bacterium 1978231 Bacteria Bacteria 132 6.89e-36   NR MDQ7008653.1 1978231 g2495 i0 78.9 0.446280991735537 90 19 44.6 0 492 223 22 111 MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] diamond 270 132 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31055784 31055784 PRJNA438572_P_NODE_4935_length_446_cov_3.420912_g4816_i0 PRJNA438572 4935 446 3.420912 15.25726752 Acidobacteriota bacterium 1978231 Bacteria Bacteria 57 3.62e-6   NR MBS1788738.1 1978231 g4816 i0 37.1 0.780269058295964 116 69 77.4 2 97 441 973 1085 MBS1788738.1 S8 family serine peptidase [Acidobacteriota bacterium] diamond 348 57 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31149805 31149805 PRJNA438572_P_NODE_20655_length_247_cov_1.793103_g20536_i0 PRJNA438572 20655 247 1.793103 4.42896441 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 93.2 2.2100000000000003e-21   NR MFL6291331.1 2651171 g20536 i0 56.8 1.96761133603239 81 31 94.7 2 13 246 83 162 MFL6291331.1 M4 family metallopeptidase [Thermoanaerobaculia bacterium] diamond 486 93.2 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31276568 31276568 PRJNA438572_P_NODE_11615_length_302_cov_0.982533_g11496_i0 PRJNA438572 11615 302 0.982533 2.96724966 Blastocatellia bacterium 2052146 Bacteria Bacteria 43.5 0.0388   NR HEX4945165.1 2052146 g11496 i0 33.8 0.764900662251656 77 47 75.5 3 41 268 47 120 HEX4945165.1 hypothetical protein [Blastocatellia bacterium] diamond 231 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31276574 31276574 PRJNA438572_P_NODE_22415_length_245_cov_0.906977_g22296_i0 PRJNA438572 22415 245 0.906977 2.22209365 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 70.1 8.96e-12   NR HEY3043610.1 2910147 g22296 i0 43 0.96734693877551 79 45 96.7 0 243 7 1050 1128 HEY3043610.1 autotransporter domain-containing protein [Vicinamibacterales bacterium] diamond 237 70.1 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31561547 31561547 PRJNA438572_P_NODE_17716_length_252_cov_0.871508_g17597_i0 PRJNA438572 17716 252 0.871508 2.19620016 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0407   NR PYV38579.1 1978231 g17597 i0 45.2 0.5 42 23 50 0 125 250 93 134 PYV38579.1 MAG: hypothetical protein DMG06_25325 [Acidobacteriota bacterium] diamond 126 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31957174 31957174 PRJNA438572_P_NODE_9057_length_339_cov_0.917293_g8938_i0 PRJNA438572 9057 339 0.917293 3.10962327 Pseudomonadati 3379134 Bacteria Bacteria 132 1.09e-34   NR HYY69605.1 2282142 g8938 i0 57.3 5.88495575221239 110 45 97.3 2 10 339 236 343 HYY69605.1 PHB depolymerase family esterase [Terriglobales bacterium] diamond 1995 132 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
32067397 32067397 PRJNA438572_P_NODE_2698_length_594_cov_2.397313_g2582_i0 PRJNA438572 2698 594 2.397313 14.24003922 Acidobacteriota bacterium 1978231 Bacteria Bacteria 137 6.749999999999999e-38   NR MDQ7008653.1 1978231 g2582 i0 74.8 0.52020202020202 103 26 52 0 513 205 8 110 MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] diamond 309 137 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32352549 32352549 PRJNA438572_P_NODE_7239_length_375_cov_1.549669_g7120_i0 PRJNA438572 7239 375 1.549669 5.81125875 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 197 2.82e-60   NR HRC88013.1 2651171 g7120 i0 87.4 0.888 111 14 88.8 0 3 335 200 310 HRC88013.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 333 197 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32652628 32652628 PRJNA438572_P_NODE_5240_length_434_cov_1.966759_g5121_i0 PRJNA438572 5240 434 1.966759 8.53573406 Pseudomonadati 3379134 Bacteria Bacteria 174 2.91e-51   NR MCX6622283.1 1978231 g5121 i0 58.2 22.4377880184332 141 55 97.5 1 428 6 6 142 MCX6622283.1 aldolase/citrate lyase family protein [Acidobacteriota bacterium] diamond 9738 174 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32731252 32731252 PRJNA438572_P_NODE_7580_length_368_cov_1.057627_g7461_i0 PRJNA438572 7580 368 1.057627 3.89206736 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.4 0.0131   NR MDP9161498.1 1978231 g7461 i0 29.7 0.823369565217391 101 54 82.3 2 337 35 125 208 MDP9161498.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein [Acidobacteriota bacterium] diamond 303 45.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;