RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA438572", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA438572 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
435038 435038 PRJNA438572_P_NODE_22981_length_244_cov_0.912281_g22862_i0 PRJNA438572 22981 244 0.912281 2.22596564 Cryptomycota sp. 2012228 Fungi Fungi 195 3.46e-45   NTclustered gi|2468791071|gb|OQ702935.1| 2012228 g22862 i0 86.932 75.3073770491803 176 20 71 3 18 191 3784 3610 Cryptomycota sp. isolate PSC281 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18375 195 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
9363142 9363142 PRJNA438572_P_NODE_428_length_1276_cov_5.805486_g384_i0 PRJNA438572 428 1276 5.805486 74.07800136 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 287 1.22e-91   NR PJF16902.1 1246581 g384 i0 64.4 5.80015673981191 236 81 55.3 3 174 878 24 257 PJF16902.1 hypothetical protein PSACC_03283 [Paramicrosporidium saccamoebae] diamond 7401 287 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
10638981 10638981 PRJNA438572_P_NODE_24829_length_230_cov_4.732484_g24710_i0 PRJNA438572 24829 230 4.732484 10.8847132 Rozella allomycis CSF55 988480 Fungi Fungi 81.6 1.21e-16   NR EPZ34692.1 988480 g24710 i0 66.2 4.09565217391304 65 21 83.5 1 18 209 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 81.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;