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contig_metadata

23 rows where bioproject = "PRJNA438572", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 23 ✖

tax_kingdom 1

  • Bacillati · 23 ✖

bioproject 1

  • PRJNA438572 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
434869 434869 PRJNA438572_P_NODE_13441_length_283_cov_1.323810_g13322_i0 PRJNA438572 13441 283 1.32381 3.7463823 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 152 2.4999999999999997e-32   NTclustered gi|2874253812|emb|OY969796.1| 1672391 g13322 i0 76.491 1.46643109540636 285 63 100 4 1 283 441211 440929 MAG: uncultured Chloroflexia bacterium isolate MFD01872.bin.1.103 genome assembly, chromosome: 1 blastn 415 152 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
1709795 1709795 PRJNA438572_P_NODE_14862_length_270_cov_1.187817_g14743_i0 PRJNA438572 14862 270 1.187817 3.2071059 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 167 8.47e-37   NTclustered gi|470481958|ref|NR_076505.1| 357808 g14743 i0 79.231 9.2962962962963 260 38 94 13 16 270 1428 1180 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 2510 167 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
24042903 24042903 PRJNA438572_P_NODE_3399_length_534_cov_2.696312_g3281_i0 PRJNA438572 3399 534 2.696312 14.39830608 Herpetosiphon 64 Bacteria Bacteria 412 2.0899999999999993e-110   NTclustered gi|470482680|ref|NR_076546.1| 65 g3281 i0 81.765 251.790262172285 510 77 94 15 1 504 937 438 Herpetosiphon aurantiacus strain DSM 785 23S ribosomal RNA gene, complete sequence blastn 134456 412 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon aurantiacus
24661456 24661456 PRJNA438572_P_NODE_7840_length_363_cov_1.058621_g7721_i0 PRJNA438572 7840 363 1.058621 3.84279423 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 60.2 2.06e-4   NTclustered gi|2814788336|emb|OY760867.2| 2026734 g7721 i0 97.143 0.575757575757576 35 1 10 0 125 159 3495592 3495558 MAG: Dehalococcoidia bacterium isolate ec36dd00-29ce-491f-9a3f-6816ace52b4b genome assembly, chromosome: 1 blastn 209 60.2 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
26854753 26854753 PRJNA438572_P_NODE_5941_length_410_cov_1.620178_g5822_i0 PRJNA438572 5941 410 1.620178 6.6427298 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 50.4 3.9e-4   NR MCC6387746.1 2026734 g5822 i0 34.7 1.16341463414634 75 49 54.9 0 362 138 161 235 MCC6387746.1 SH3 domain-containing protein [Dehalococcoidia bacterium] diamond 477 50.4 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
27044395 27044395 PRJNA438572_P_NODE_22562_length_245_cov_0.877907_g22443_i0 PRJNA438572 22562 245 0.877907 2.15087215 Caldilineaceae bacterium 2614250 Bacteria Bacteria 147 1.4e-40   NR MCC6458143.1 2614250 g22443 i0 91.1 2.91428571428571 79 7 96.7 0 3 239 22 100 MCC6458143.1 amidohydrolase [Caldilineaceae bacterium] diamond 714 147 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
27075971 27075971 PRJNA438572_P_NODE_18142_length_251_cov_0.876404_g18023_i0 PRJNA438572 18142 251 0.876404 2.19977404 Chloroflexota bacterium 2026724 Bacteria Bacteria 114 1.08e-27   NR RIK53353.1 2026724 g18023 i0 72.3 1.9601593625498 83 23 99.2 0 250 2 236 318 RIK53353.1 MAG: two-component sensor histidine kinase [Chloroflexota bacterium] diamond 492 114 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27455419 27455419 PRJNA438572_P_NODE_6823_length_385_cov_1.250000_g6704_i0 PRJNA438572 6823 385 1.25 4.8125 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 45.1 0.0295   NR MAU10680.1 2024896 g6704 i0 41 0.646753246753247 83 43 64.7 2 352 104 3558 3634 MAU10680.1 hypothetical protein [Anaerolineaceae bacterium] diamond 249 45.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
27613252 27613252 PRJNA438572_P_NODE_23904_length_243_cov_0.876471_g23785_i0 PRJNA438572 23904 243 0.876471 2.12982453 Litorilinea aerophila 1204385 Bacteria Bacteria 78.6 8.9e-15   NR WP_229964171.1 1204385 g23785 i0 57 4.87654320987654 79 34 97.5 0 238 2 565 643 WP_229964171.1 MFS transporter [Litorilinea aerophila] diamond 1185 78.6 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae Litorilinea Litorilinea aerophila
28212729 28212729 PRJNA438572_P_NODE_21666_length_246_cov_0.901734_g21547_i0 PRJNA438572 21666 246 0.901734 2.21826564 Chloroflexota bacterium 2026724 Bacteria Bacteria 55.1 3.11e-7   NR MEO8393802.1 2026724 g21547 i0 37.3 0.914634146341463 75 46 90.2 1 3 224 45 119 MEO8393802.1 RDD family protein [Chloroflexota bacterium] diamond 225 55.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28402440 28402440 PRJNA438572_P_NODE_23606_length_243_cov_0.917647_g23487_i0 PRJNA438572 23606 243 0.917647 2.22988221 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.4 0.0483   NR MBA2631456.1 2026724 g23487 i0 37.7 0.753086419753086 61 32 72.8 2 199 23 63 119 MBA2631456.1 hypothetical protein [Chloroflexota bacterium] diamond 183 42.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28497267 28497267 PRJNA438572_P_NODE_23107_length_244_cov_0.912281_g22988_i0 PRJNA438572 23107 244 0.912281 2.22596564 Caldilineaceae bacterium 2614250 Bacteria Bacteria 118 3.88e-29   NR MCB9137102.1 2614250 g22988 i0 74.3 0.860655737704918 70 18 86.1 0 2 211 401 470 MCB9137102.1 fucose isomerase [Caldilineaceae bacterium] diamond 210 118 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
28592000 28592000 PRJNA438572_P_NODE_15587_length_263_cov_2.273684_g15468_i0 PRJNA438572 15587 263 2.273684 5.97978892 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 42.7 0.0431   NR HEU5205436.1 2952938 g15468 i0 49.1 0.627376425855513 55 25 59.3 2 179 24 203 257 HEU5205436.1 c-type cytochrome [Candidatus Limnocylindrales bacterium] diamond 165 42.7 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
29981274 29981274 PRJNA438572_P_NODE_71_length_2160_cov_1.712027_g62_i0 PRJNA438572 71 2160 1.712027 36.9797832 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 113 1.88e-21   NR MFA5379264.1 2026734 g62 i0 30.3 0.779166666666667 300 185 41 9 2037 1153 1558 1838 MFA5379264.1 PKD domain-containing protein [Dehalococcoidia bacterium] diamond 1683 113 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
30455480 30455480 PRJNA438572_P_NODE_13913_length_279_cov_1.014563_g13794_i0 PRJNA438572 13913 279 1.014563 2.83063077 Chloroflexota bacterium 2026724 Bacteria Bacteria 45.8 0.00469   NR MDP9235829.1 2026724 g13794 i0 36.6 1 93 51 94.6 3 8 271 337 426 MDP9235829.1 NHL repeat-containing protein [Chloroflexota bacterium] diamond 279 45.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30518334 30518334 PRJNA438572_P_NODE_20293_length_248_cov_0.891429_g20174_i0 PRJNA438572 20293 248 0.891429 2.21074392 Anaerolineales bacterium 2073117 Bacteria Bacteria 103 4.0999999999999994e-24   NR HEX5942454.1 2073117 g20174 i0 89.5 0.689516129032258 57 6 69 0 78 248 149 205 HEX5942454.1 GGDEF domain-containing protein [Anaerolineales bacterium] diamond 171 103 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30707853 30707853 PRJNA438572_P_NODE_23294_length_243_cov_1.617647_g23175_i0 PRJNA438572 23294 243 1.617647 3.93088221 Chloroflexota bacterium 2026724 Bacteria Bacteria 70.9 4.62e-12   NR MBI4339085.1 2026724 g23175 i0 54.4 3.87654320987654 79 30 96.3 3 5 238 1183 1256 MBI4339085.1 fibronectin type III domain-containing protein [Chloroflexota bacterium] diamond 942 70.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30787441 30787441 PRJNA438572_P_NODE_12634_length_290_cov_1.474654_g12515_i0 PRJNA438572 12634 290 1.474654 4.2764966 Chloroflexota 200795 Bacteria Bacteria 52 9.8199999999999992e-06   NR MBA4181137.1 1872519 g12515 i0 84 1.81034482758621 25 4 25.9 0 289 215 125 149 MBA4181137.1 nucleoside-diphosphate kinase [Anaerolinea sp.] diamond 525 52 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Anaerolinea Anaerolinea sp.
31403368 31403368 PRJNA438572_P_NODE_22016_length_245_cov_0.906977_g21897_i0 PRJNA438572 22016 245 0.906977 2.22209365 Roseiflexaceae bacterium 2762507 Bacteria Bacteria 130 5.66e-36   NR HEU5090624.1 2762507 g21897 i0 70.4 1.98367346938776 81 24 99.2 0 2 244 77 157 HEU5090624.1 Rad52/Rad22 family DNA repair protein [Roseiflexaceae bacterium] diamond 486 130 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae   Roseiflexaceae bacterium
31957172 31957172 PRJNA438572_P_NODE_4237_length_477_cov_4.235149_g4119_i0 PRJNA438572 4237 477 4.235149 20.20166073 Bacteria 2 Bacteria Bacteria 98.2 9.01e-24   NR MEO0563457.1 2026724 g4119 i0 73.8 2.79245283018868 61 16 38.4 0 108 290 3 63 MEO0563457.1 cold-shock protein [Chloroflexota bacterium] diamond 1332 98.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32652626 32652626 PRJNA438572_P_NODE_23740_length_243_cov_0.917647_g23621_i0 PRJNA438572 23740 243 0.917647 2.22988221 Bacteria 2 Bacteria Bacteria 48.1 4.34e-4   NR HEX2696215.1 2073117 g23621 i0 38.8 2.34567901234568 80 42 98.8 2 241 2 178 250 HEX2696215.1 Gfo/Idh/MocA family oxidoreductase [Anaerolineales bacterium] diamond 570 48.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32731237 32731237 PRJNA438572_P_NODE_12240_length_294_cov_1.217195_g12121_i0 PRJNA438572 12240 294 1.217195 3.5785533 Anaerolineae bacterium 2052143 Bacteria Bacteria 44.7 0.0142   NR HEX9076739.1 2052143 g12121 i0 37.8 1.6734693877551 82 44 83.7 1 282 37 307 381 HEX9076739.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Anaerolineae bacterium] diamond 492 44.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32793873 32793873 PRJNA438572_P_NODE_1640_length_746_cov_3.588410_g1536_i0 PRJNA438572 1640 746 3.58841 26.7695386 Anaerolineae bacterium 2052143 Bacteria Bacteria 80.9 2.54e-15   NR MCW5848612.1 2052143 g1536 i0 43.5 0.526809651474531 131 67 52.7 3 45 437 1 124 MCW5848612.1 profilin [Anaerolineae bacterium] diamond 393 80.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;