contig_metadata
23 rows where bioproject = "PRJNA438572", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 435059 | 435059 | PRJNA438572_P_NODE_24121_length_242_cov_0.923077_g24002_i0 | PRJNA438572 | 24121 | 242 | 0.923077 | 2.23384634 | Lacipirellula limnantheis | 2528024 | Bacteria | Bacteria | 364 | 2.4699999999999992e-96 | NTclustered | gi|1712529062|gb|CP036339.1| | 2528024 | g24002 | i0 | 93.802 | 177.099173553719 | 242 | 15 | 100 | 0 | 1 | 242 | 5171957 | 5171716 | Lacipirellula limnantheis strain I41 chromosome | blastn | 42858 | 364 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellula | Lacipirellula limnantheis | |
| 5538709 | 5538709 | PRJNA438572_P_NODE_19425_length_249_cov_0.886364_g19306_i0 | PRJNA438572 | 19425 | 249 | 0.886364 | 2.20704636 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 114 | 5.119999999999999e-28 | NR | HEV3165845.1 | 2691532 | g19306 | i0 | 63.4 | 4.93975903614458 | 82 | 30 | 98.8 | 0 | 3 | 248 | 21 | 102 | HEV3165845.1 exodeoxyribonuclease VII large subunit [Isosphaeraceae bacterium] | diamond | 1230 | 114 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 5538713 | 5538713 | PRJNA438572_P_NODE_19525_length_249_cov_0.886364_g19406_i0 | PRJNA438572 | 19525 | 249 | 0.886364 | 2.20704636 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 265 | 2.6599999999999997e-66 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g19406 | i0 | 86.722 | 40.8353413654619 | 241 | 28 | 96 | 3 | 11 | 249 | 1830851 | 1830613 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 10168 | 265 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium | |||
| 8088095 | 8088095 | PRJNA438572_P_NODE_12927_length_288_cov_0.855814_g12808_i0 | PRJNA438572 | 12927 | 288 | 0.855814 | 2.46474432 | Lacipirellula parvula | 2650471 | Bacteria | Bacteria | 318 | 2.3799999999999995e-82 | NTclustered | gi|1761017769|dbj|AP021861.1| | 2650471 | g12808 | i0 | 87.368 | 124.604166666667 | 285 | 26 | 98 | 8 | 1 | 281 | 5162957 | 5163235 | Lacipirellula parvula PX69 DNA, complete genome | blastn | 35886 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellula | Lacipirellula parvula | |
| 9362999 | 9362999 | PRJNA438572_P_NODE_18608_length_250_cov_2.220339_g18489_i0 | PRJNA438572 | 18608 | 250 | 2.220339 | 5.5508475 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 285 | 2.05e-72 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g18489 | i0 | 87.2 | 1 | 250 | 32 | 100 | 0 | 1 | 250 | 2521034 | 2520785 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 250 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 10638776 | 10638776 | PRJNA438572_P_NODE_11749_length_300_cov_1.030837_g11630_i0 | PRJNA438572 | 11749 | 300 | 1.030837 | 3.092511 | Aeoliella mucimassa | 2527972 | Bacteria | Bacteria | 392 | 1.4499999999999994e-104 | NTclustered | gi|1712622222|gb|CP036278.1| | 2527972 | g11630 | i0 | 90.635 | 116.666666666667 | 299 | 23 | 99 | 5 | 1 | 296 | 2043155 | 2043451 | Aeoliella mucimassa strain Pan181 chromosome, complete genome | blastn | 35000 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Aeoliella | Aeoliella mucimassa | |
| 11913973 | 11913973 | PRJNA438572_P_NODE_9450_length_332_cov_1.806950_g9331_i0 | PRJNA438572 | 9450 | 332 | 1.80695 | 5.999074 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 176 | 8.66e-51 | NR | MBF0197637.1 | 2026780 | g9331 | i0 | 73.6 | 3.97590361445783 | 110 | 29 | 99.4 | 0 | 2 | 331 | 97 | 206 | MBF0197637.1 adenosylhomocysteinase [Planctomycetota bacterium] | diamond | 1320 | 176 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27455413 | 27455413 | PRJNA438572_P_NODE_23663_length_243_cov_0.917647_g23544_i0 | PRJNA438572 | 23663 | 243 | 0.917647 | 2.22988221 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42.7 | 0.0351 | NR | MCC8180000.1 | 2026780 | g23544 | i0 | 42.2 | 0.555555555555556 | 45 | 26 | 55.6 | 0 | 157 | 23 | 244 | 288 | MCC8180000.1 alcohol dehydrogenase catalytic domain-containing protein [Planctomycetota bacterium] | diamond | 135 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28623623 | 28623623 | PRJNA438572_P_NODE_17847_length_252_cov_0.871508_g17728_i0 | PRJNA438572 | 17847 | 252 | 0.871508 | 2.19620016 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 112 | 1.81e-27 | NR | MES2792330.1 | 2026780 | g17728 | i0 | 92.6 | 1.28571428571429 | 54 | 4 | 64.3 | 0 | 3 | 164 | 315 | 368 | MES2792330.1 Gfo/Idh/MocA family oxidoreductase [Planctomycetota bacterium] | diamond | 324 | 112 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28686863 | 28686863 | PRJNA438572_P_NODE_18867_length_250_cov_0.881356_g18748_i0 | PRJNA438572 | 18867 | 250 | 0.881356 | 2.20339 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 44.3 | 0.0117 | NR | HEY7424931.1 | 2052164 | g18748 | i0 | 40.5 | 1.488 | 42 | 25 | 50.4 | 0 | 217 | 92 | 246 | 287 | HEY7424931.1 serine/threonine-protein kinase [Gemmataceae bacterium] | diamond | 372 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 28734534 | 28734534 | PRJNA438572_P_NODE_19587_length_249_cov_0.886364_g19468_i0 | PRJNA438572 | 19587 | 249 | 0.886364 | 2.20704636 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 56.2 | 7.18e-7 | NR | HEY3322391.1 | 2026780 | g19468 | i0 | 37.5 | 2.89156626506024 | 80 | 40 | 96.4 | 2 | 9 | 248 | 687 | 756 | HEY3322391.1 PA14 domain-containing protein [Planctomycetota bacterium] | diamond | 720 | 56.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28844294 | 28844294 | PRJNA438572_P_NODE_17688_length_252_cov_0.871508_g17569_i0 | PRJNA438572 | 17688 | 252 | 0.871508 | 2.19620016 | Candidatus Uabimicrobium amorphum | 2596890 | Bacteria | Bacteria | 90.1 | 8.51e-19 | NR | WP_151967754.1 | 2596890 | g17569 | i0 | 59.4 | 0.821428571428571 | 69 | 28 | 82.1 | 0 | 237 | 31 | 244 | 312 | WP_151967754.1 nicotinate phosphoribosyltransferase [Candidatus Uabimicrobium amorphum] | diamond | 207 | 90.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Uabimicrobiia | Candidatus Uabimicrobiales | Candidatus Uabimicrobiaceae | Candidatus Uabimicrobium | Candidatus Uabimicrobium amorphum | |
| 29349744 | 29349744 | PRJNA438572_P_NODE_21149_length_247_cov_0.896552_g21030_i0 | PRJNA438572 | 21149 | 247 | 0.896552 | 2.21448344 | Lacipirellulaceae bacterium | 2691534 | Bacteria | Bacteria | 45.1 | 8.64e-4 | NR | HYO24935.1 | 2691534 | g21030 | i0 | 70.4 | 0.327935222672065 | 27 | 8 | 32.8 | 0 | 178 | 98 | 54 | 80 | HYO24935.1 WGxxGxxG family protein [Lacipirellulaceae bacterium] | diamond | 81 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellulaceae bacterium | ||
| 30044323 | 30044323 | PRJNA438572_P_NODE_7931_length_361_cov_1.083333_g7812_i0 | PRJNA438572 | 7931 | 361 | 1.083333 | 3.91083213 | Posidoniimonas polymericola | 2528002 | Bacteria | Bacteria | 55.5 | 5.14e-6 | NR | WP_146583982.1 | 2528002 | g7812 | i0 | 30.3 | 1.88642659279778 | 109 | 76 | 90.6 | 0 | 1 | 327 | 717 | 825 | WP_146583982.1 LamG domain-containing protein [Posidoniimonas polymericola] | diamond | 681 | 55.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Posidoniimonas | Posidoniimonas polymericola | |
| 30265864 | 30265864 | PRJNA438572_P_NODE_20812_length_247_cov_0.896552_g20693_i0 | PRJNA438572 | 20812 | 247 | 0.896552 | 2.21448344 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 48.5 | 3.45e-4 | NR | MEK7411798.1 | 2026780 | g20693 | i0 | 48.4 | 0.753036437246964 | 62 | 31 | 74.1 | 1 | 184 | 2 | 7 | 68 | MEK7411798.1 hypothetical protein [Planctomycetota bacterium] | diamond | 186 | 48.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30313999 | 30313999 | PRJNA438572_P_NODE_14972_length_269_cov_1.193878_g14853_i0 | PRJNA438572 | 14972 | 269 | 1.193878 | 3.21153182 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 144 | 1.33e-39 | NR | MBV8128625.1 | 2026779 | g14853 | i0 | 70.8 | 24.5576208178439 | 89 | 26 | 99.3 | 0 | 267 | 1 | 104 | 192 | MBV8128625.1 phosphoenolpyruvate carboxykinase (GTP) [Planctomycetaceae bacterium] | diamond | 6606 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 30739450 | 30739450 | PRJNA438572_P_NODE_154_length_1774_cov_9.566138_g133_i0 | PRJNA438572 | 154 | 1774 | 9.566138 | 169.70328812 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 63.9 | 2.2e-6 | NR | MFN0136844.1 | 2026778 | g133 | i0 | 39.8 | 0.272266065388952 | 161 | 82 | 26.2 | 6 | 1161 | 1625 | 1145 | 1296 | MFN0136844.1 choice-of-anchor tandem repeat NxxGxxAF-containing protein [Phycisphaerae bacterium] | diamond | 483 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 30960758 | 30960758 | PRJNA438572_P_NODE_20794_length_247_cov_0.896552_g20675_i0 | PRJNA438572 | 20794 | 247 | 0.896552 | 2.21448344 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 44.3 | 0.0112 | NR | HEV3255801.1 | 2052164 | g20675 | i0 | 37.5 | 0.874493927125506 | 72 | 37 | 77.7 | 1 | 197 | 6 | 975 | 1046 | HEV3255801.1 protein kinase [Gemmataceae bacterium] | diamond | 216 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 31181524 | 31181524 | PRJNA438572_P_NODE_17935_length_251_cov_2.617978_g17816_i0 | PRJNA438572 | 17935 | 251 | 2.617978 | 6.57112478 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 44.7 | 0.00804 | NR | MBY0307982.1 | 2052180 | g17816 | i0 | 27.6 | 0.908366533864542 | 76 | 54 | 90.8 | 1 | 4 | 231 | 60 | 134 | MBY0307982.1 hypothetical protein [Phycisphaerales bacterium] | diamond | 228 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 31719529 | 31719529 | PRJNA438572_P_NODE_3237_length_547_cov_1.388186_g3119_i0 | PRJNA438572 | 3237 | 547 | 1.388186 | 7.59337742 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 73.9 | 1.28e-11 | NR | MCA8985046.1 | 2026779 | g3119 | i0 | 28.2 | 1.90859232175503 | 174 | 101 | 89.4 | 4 | 537 | 49 | 896 | 1056 | MCA8985046.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 1044 | 73.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 32289378 | 32289378 | PRJNA438572_P_NODE_13559_length_282_cov_1.248804_g13440_i0 | PRJNA438572 | 13559 | 282 | 1.248804 | 3.52162728 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 66.2 | 2.68e-10 | NR | HEX7010758.1 | 2026777 | g13440 | i0 | 45.7 | 2.21276595744681 | 70 | 38 | 74.5 | 0 | 2 | 211 | 155 | 224 | HEX7010758.1 signal peptide peptidase SppA [Phycisphaeraceae bacterium] | diamond | 624 | 66.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 32542369 | 32542369 | PRJNA438572_P_NODE_23539_length_243_cov_0.917647_g23420_i0 | PRJNA438572 | 23539 | 243 | 0.917647 | 2.22988221 | Gimesia chilikensis | 2605989 | Bacteria | Bacteria | 50.8 | 4.98e-5 | NR | WP_145042384.1 | 2605989 | g23420 | i0 | 33.3 | 1.92592592592593 | 78 | 51 | 96.3 | 1 | 2 | 235 | 58 | 134 | WP_145042384.1 serpin family protein [Gimesia chilikensis] | diamond | 468 | 50.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Gimesia | Gimesia chilikensis | |
| 32762602 | 32762602 | PRJNA438572_P_NODE_20860_length_247_cov_0.896552_g20741_i0 | PRJNA438572 | 20860 | 247 | 0.896552 | 2.21448344 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 102 | 1.2299999999999997e-23 | NR | MAX25395.1 | 2026777 | g20741 | i0 | 66.7 | 1.96761133603239 | 72 | 24 | 87.4 | 0 | 246 | 31 | 312 | 383 | MAX25395.1 hypothetical protein [Phycisphaeraceae bacterium] | diamond | 486 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;