RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA438111", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Thermoplasmatota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA438111 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26871171 26871171 PRJNA438111_P_NODE_70741_length_164_cov_1.970370_g70116_i0 PRJNA438111 70741 164 1.97037 3.2314068 Archaea 2157 Archaea Archaea 63.9 2.71e-10   NR HHH79445.1 2268204 g70116 i0 71.4 2.98170731707317 42 12 76.8 0 2 127 153 194 HHH79445.1 DUF4147 domain-containing protein [Thermoplasmatales archaeon] diamond 489 63.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
27566071 27566071 PRJNA438111_P_NODE_52144_length_179_cov_3.533333_g51519_i0 PRJNA438111 52144 179 3.533333 6.32466607 Archaea 2157 Archaea Archaea 51.2 1.59e-5   NR EQB71524.1 667135 g51519 i0 43.9 1.91061452513966 57 31 93.9 1 170 3 10 66 EQB71524.1 MAG: hypothetical protein AMDU1_APLC00024G0064 [Thermoplasmatales archaeon A-plasma] diamond 342 51.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon A-plasma
31672489 31672489 PRJNA438111_P_NODE_82597_length_156_cov_2.188976_g81972_i0 PRJNA438111 82597 156 2.188976 3.41480256 root 1 Root_unresolved Root_unresolved 84.7 1.6e-17   NR EQB71524.1 667135 g81972 i0 64.7 13.7307692307692 51 18 98.1 0 2 154 225 275 EQB71524.1 MAG: hypothetical protein AMDU1_APLC00024G0064 [Thermoplasmatales archaeon A-plasma] diamond 2142 84.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon A-plasma
32825570 32825570 PRJNA438111_P_NODE_14940_length_271_cov_3.801653_g14315_i0 PRJNA438111 14940 271 3.801653 10.30247963 Thermoplasmata archaeon 1906666 Archaea Archaea 86.3 4.59e-18   NR MDD4307556.1 1906666 g14315 i0 46.7 0.996309963099631 90 44 99.6 1 270 1 72 157 MDD4307556.1 PhzF family phenazine biosynthesis isomerase [Thermoplasmata archaeon] diamond 270 86.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;