RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA438111" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA438111 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27549789 27549789 PRJNA438111_P_NODE_66204_length_167_cov_2.000000_g65579_i0 PRJNA438111 66204 167 2 3.34 Minisyncoccota bacterium 2053589 Bacteria Bacteria 61.6 8.75e-10   NR HEY6019071.1 2053589 g65579 i0 66.7 0.862275449101796 48 16 86.2 0 24 167 83 130 HEY6019071.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 144 61.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29696515 29696515 PRJNA438111_P_NODE_1870_length_699_cov_8.835821_g1481_i0 PRJNA438111 1870 699 8.835821 61.76238879 Minisyncoccota bacterium 2053589 Bacteria Bacteria 284 4.78e-92   NR MFA6159318.1 2053589 g1481 i0 65.6 0.909871244635193 212 71 90.1 1 697 68 46 257 MFA6159318.1 protein kinase [Candidatus Paceibacterota bacterium] diamond 636 284 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;