RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA438111" and tax_phylum = "Candidatus Bipolaricaulota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA438111 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28118136 28118136 PRJNA438111_P_NODE_71145_length_164_cov_1.051852_g70520_i0 PRJNA438111 71145 164 1.051852 1.72503728 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 80.5 5.4e-16   NR MCX6096576.1 2306012 g70520 i0 70.9 1.00609756097561 55 15 98.8 1 1 162 262 316 MCX6096576.1 M28 family peptidase [Candidatus Bipolaricaulota bacterium] diamond 165 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
30945485 30945485 PRJNA438111_P_NODE_15614_length_266_cov_3.924051_g14989_i0 PRJNA438111 15614 266 3.924051 10.43797566 root 1 Root_unresolved Root_unresolved 99.8 2.22e-22   NR HHK67223.1 2053493 g14989 i0 55.3 1.95112781954887 85 38 95.9 0 11 265 34 118 HHK67223.1 ATPase [Candidatus Acetothermia bacterium] diamond 519 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;