RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA438111", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJNA438111 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4261495 4261495 PRJNA438111_P_NODE_63964_length_168_cov_4.877698_g63339_i0 PRJNA438111 63964 168 4.877698 8.19453264 Synergistales bacterium 53_16 1635273 Bacteria Bacteria 99.8 1.1200000000000001e-22   NR KUK57900.1 1635273 g63339 i0 83 0.946428571428571 53 9 94.6 0 167 9 161 213 KUK57900.1 MAG: Uncharacterized protein XD80_1156, partial [Synergistales bacterium 53_16] diamond 159 99.8 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium 53_16
28292290 28292290 PRJNA438111_P_NODE_65966_length_167_cov_2.826087_g65341_i0 PRJNA438111 65966 167 2.826087 4.71956529 Bacteria 2 Bacteria Bacteria 92 5.69e-20   NR WP_367337685.1 1872489 g65341 i0 78.2 4.94011976047904 55 12 98.8 0 165 1 254 308 WP_367337685.1 RecQ family ATP-dependent DNA helicase [Aminivibrio sp.] diamond 825 92 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminivibrio Aminivibrio sp.
32289348 32289348 PRJNA438111_P_NODE_6619_length_387_cov_2.519553_g6019_i0 PRJNA438111 6619 387 2.519553 9.75067011 Synergistota bacterium 2268202 Bacteria Bacteria 103 1.1799999999999999e-23   NR MCD6363191.1 2268202 g6019 i0 41.4 4.96124031007752 128 75 99.2 0 385 2 7 134 MCD6363191.1 dihydrodipicolinate synthase family protein [Synergistota bacterium] diamond 1920 103 1 Bacteria   Thermotogati Synergistota         Synergistota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;