RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA438111", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA438111 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17011146 17011146 PRJNA438111_P_NODE_21294_length_233_cov_4.416667_g20669_i0 PRJNA438111 21294 233 4.416667 10.29083411 Rozella allomycis CSF55 988480 Fungi Fungi 113 1.83e-28   NR EPZ37078.1 988480 g20669 i0 74 0.991416309012876 77 20 99.1 0 231 1 102 178 EPZ37078.1 Prohibitin-2 [Rozella allomycis CSF55] diamond 231 113 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
23387037 23387037 PRJNA438111_P_NODE_9319_length_333_cov_3.529605_g8699_i0 PRJNA438111 9319 333 3.529605 11.75358465 Rozella sp. 1932610 Fungi Fungi 370 7.63e-98   NTclustered gi|2468791001|gb|OQ702917.1| 1932610 g8699 i0 86.842 102.825825825826 342 31 100 10 1 333 3375 3711 Rozella sp. isolate PSC230 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 34241 370 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.
27107384 27107384 PRJNA438111_P_NODE_6542_length_389_cov_2.080556_g5943_i0 PRJNA438111 6542 389 2.080556 8.09336284 Rozella allomycis CSF55 988480 Fungi Fungi 138 1.42e-35   NR EPZ31162.1 988480 g5943 i0 47.7 4.20308483290488 149 50 94.1 3 1 366 297 444 EPZ31162.1 Serine/threonine-protein phosphatase 2B catalytic subunit [Rozella allomycis CSF55] diamond 1635 138 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28655057 28655057 PRJNA438111_P_NODE_78007_length_159_cov_3.823077_g77382_i0 PRJNA438111 78007 159 3.823077 6.07869243 Rozella allomycis CSF55 988480 Fungi Fungi 48.1 1.47e-4   NR EPZ31486.1 988480 g77382 i0 52.8 1 53 21 96.2 2 6 158 1080 1130 EPZ31486.1 DNA-directed DNA polymerase, family B domain-containing protein [Rozella allomycis CSF55] diamond 159 48.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29097150 29097150 PRJNA438111_P_NODE_79588_length_158_cov_3.100775_g78963_i0 PRJNA438111 79588 158 3.100775 4.8992245 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 55.1 2.53e-7   NR PJF18198.1 1246581 g78963 i0 56.3 0.911392405063291 48 20 89.2 1 17 157 108 155 PJF18198.1 hypothetical protein PSACC_01987 [Paramicrosporidium saccamoebae] diamond 144 55.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
32857005 32857005 PRJNA438111_P_NODE_25560_length_216_cov_1.588235_g24935_i0 PRJNA438111 25560 216 1.588235 3.4305876 Rozella allomycis CSF55 988480 Fungi Fungi 67.4 5.17e-11   NR EPZ35056.1 988480 g24935 i0 50 4 72 35 98.6 1 215 3 149 220 EPZ35056.1 Sec1-like 2 domain-containing protein [Rozella allomycis CSF55] diamond 864 67.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;