RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA438111", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA438111 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9362461 9362461 PRJNA438111_P_NODE_62268_length_170_cov_1.007092_g61643_i0 PRJNA438111 62268 170 1.007092 1.7120564 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 108 1.25e-25   NR HVO02031.1 2952917 g61643 i0 92.9 2.96470588235294 56 4 98.8 0 1 168 696 751 HVO02031.1 FAD-dependent oxidoreductase [Candidatus Cybelea sp.] diamond 504 108 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
11913027 11913027 PRJNA438111_P_NODE_49190_length_182_cov_4.516340_g48565_i0 PRJNA438111 49190 182 4.51634 8.2197388 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 75 3.3e-9   NTclustered gi|2874253821|emb|OY969805.1| 3107663 g48565 i0 84.211 1.5989010989011 76 12 42 0 107 182 2324054 2323979 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.12 genome assembly, chromosome: 1 blastn 291 75 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
31244966 31244966 PRJNA438111_P_NODE_46395_length_186_cov_1.802548_g45770_i0 PRJNA438111 46395 186 1.802548 3.35273928 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 79.7 1.3e-15   NR MFA5507902.1 3107663 g45770 i0 63.9 0.983870967741935 61 22 98.4 0 2 184 337 397 MFA5507902.1 ABC transporter permease [Vulcanimicrobiota bacterium] diamond 183 79.7 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
32083766 32083766 PRJNA438111_P_NODE_13038_length_287_cov_4.259690_g12413_i0 PRJNA438111 13038 287 4.25969 12.2253103 FCB group 1783270 Bacteria Bacteria 61.6 1.39e-8   NR HEV2909270.1 3069296 g12413 i0 65 6.45993031358885 40 14 41.8 0 287 168 396 435 HEV2909270.1 alkaline phosphatase family protein [Candidatus Eremiobacteraceae bacterium] diamond 1854 62 0.993548387096774 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;