RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA438111", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA438111 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6811936 6811936 PRJNA438111_P_NODE_42806_length_190_cov_3.291925_g42181_i0 PRJNA438111 42806 190 3.291925 6.2546575 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 91.3 9.78e-21   NR KAF4702537.1 32597 g42181 i0 68.3 4.97368421052632 63 20 99.5 0 1 189 120 182 KAF4702537.1 Choline/ethanolaminephosphotransferase 1, partial [Perkinsus olseni] diamond 945 91.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30440014 30440014 PRJNA438111_P_NODE_35033_length_205_cov_2.306818_g34408_i0 PRJNA438111 35033 205 2.306818 4.7289769 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 94 1.49e-22   NR KAF4721824.1 32597 g34408 i0 81.4 9.62926829268293 59 11 86.3 0 184 8 1 59 KAF4721824.1 60S ribosomal protein L13A, partial [Perkinsus olseni] diamond 1974 94.7 0.992608236536431 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;