RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA438111", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA438111 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27075940 27075940 PRJNA438111_P_NODE_72662_length_163_cov_1.059701_g72037_i0 PRJNA438111 72662 163 1.059701 1.72731263 Paulinella longichromatophora 1708747 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00362   NR AUG32479.1 1708747 g72037 i0 42.6 2.79754601226994 54 28 99.4 2 1 162 66 116 AUG32479.1 plant photosystem II stability/assembly factor- like protein [Paulinella longichromatophora] diamond 456 44.3 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella longichromatophora
28718186 28718186 PRJNA438111_P_NODE_18807_length_246_cov_2.737327_g18182_i0 PRJNA438111 18807 246 2.737327 6.73382442 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 104 8.310000000000001e-27   NR MES1914920.1 1215613 g18182 i0 59.5 1.92682926829268 79 32 96.3 0 3 239 44 122 MES1914920.1 hypothetical protein [Cercozoa sp. M6MM] diamond 474 104 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30360757 30360757 PRJNA438111_P_NODE_25672_length_215_cov_4.462366_g25047_i0 PRJNA438111 25672 215 4.462366 9.5940869 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 50.8 3.5e-5   NR MES1912265.1 1215613 g25047 i0 41 2.55348837209302 61 36 85.1 0 185 3 4 64 MES1912265.1 hypothetical protein [Cercozoa sp. M6MM] diamond 549 50.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;