contig_metadata
6 rows where bioproject = "PRJNA438111", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5538233 | 5538233 | PRJNA438111_P_NODE_6605_length_387_cov_4.318436_g6005_i0 | PRJNA438111 | 6605 | 387 | 4.318436 | 16.71234732 | Bacteria | 2 | Bacteria | Bacteria | 195 | 1.49e-57 | NR | MCH2174537.1 | 2053569 | g6005 | i0 | 76 | 6 | 129 | 31 | 100 | 0 | 1 | 387 | 5 | 133 | MCH2174537.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Lentisphaeria bacterium] | diamond | 2322 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 8743439 | 8743439 | PRJNA438111_P_NODE_2487_length_613_cov_6.693493_g2041_i0 | PRJNA438111 | 2487 | 613 | 6.693493 | 41.03111209 | Bacteria | 2 | Bacteria | Bacteria | 306 | 2.7399999999999998e-99 | NR | NLZ64708.1 | 1932692 | g2041 | i0 | 69.1 | 24.9494290375204 | 204 | 63 | 99.8 | 0 | 1 | 612 | 273 | 476 | NLZ64708.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Lentisphaerota bacterium] | diamond | 15294 | 309 | 0.990291262135922 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 23386539 | 23386539 | PRJNA438111_P_NODE_55199_length_176_cov_2.891156_g54574_i0 | PRJNA438111 | 55199 | 176 | 2.891156 | 5.08843456 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 69.7 | 4.65e-12 | NR | NLE68326.1 | 1932692 | g54574 | i0 | 60.3 | 0.988636363636364 | 58 | 19 | 98.9 | 1 | 176 | 3 | 205 | 258 | NLE68326.1 glycoside hydrolase family 2 protein [Lentisphaerota bacterium] | diamond | 174 | 69.7 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 28212687 | 28212687 | PRJNA438111_P_NODE_63506_length_169_cov_1.364286_g62881_i0 | PRJNA438111 | 63506 | 169 | 1.364286 | 2.30564334 | Lentisphaerae bacterium GWF2_49_21 | 1798573 | Bacteria | Bacteria | 111 | 1.04e-26 | NR | OGV36904.1 | 1798573 | g62881 | i0 | 80 | 0.976331360946746 | 55 | 11 | 97.6 | 0 | 166 | 2 | 432 | 486 | OGV36904.1 MAG: hypothetical protein A2X48_16055 [Lentisphaerae bacterium GWF2_49_21] | diamond | 165 | 111 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerae bacterium GWF2_49_21 | |||||
| 28434018 | 28434018 | PRJNA438111_P_NODE_47506_length_184_cov_4.890323_g46881_i0 | PRJNA438111 | 47506 | 184 | 4.890323 | 8.99819432 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 102 | 1.5799999999999998e-23 | NR | MFA4943072.1 | 2053569 | g46881 | i0 | 75.9 | 0.945652173913043 | 58 | 14 | 94.6 | 0 | 176 | 3 | 937 | 994 | MFA4943072.1 sugar-binding protein [Lentisphaeria bacterium] | diamond | 174 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 31656043 | 31656043 | PRJNA438111_P_NODE_83917_length_155_cov_2.190476_g83292_i0 | PRJNA438111 | 83917 | 155 | 2.190476 | 3.3952378 | Victivallales bacterium | 2212475 | Bacteria | Bacteria | 48.5 | 1.02e-4 | NR | MFA6291485.1 | 2212475 | g83292 | i0 | 50 | 0.812903225806452 | 42 | 21 | 81.3 | 0 | 29 | 154 | 90 | 131 | MFA6291485.1 hypothetical protein [Victivallales bacterium] | diamond | 126 | 48.5 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;