contig_metadata
16 rows where bioproject = "PRJNA438111", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5537697 | 5537697 | PRJNA438111_P_NODE_29325_length_210_cov_4.745856_g28700_i0 | PRJNA438111 | 29325 | 210 | 4.745856 | 9.9662976 | Kiritimatiella glycovorans | 1307763 | Bacteria | Bacteria | 108 | 3.88e-19 | NTclustered | gi|827038732|gb|CP010904.1| | 1307763 | g28700 | i0 | 86.598 | 2.06666666666667 | 97 | 13 | 46 | 0 | 1 | 97 | 2668925 | 2669021 | Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome | blastn | 434 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellales | Kiritimatiellaceae | Kiritimatiella | Kiritimatiella glycovorans | |
| 26980964 | 26980964 | PRJNA438111_P_NODE_32062_length_210_cov_3.535912_g31437_i0 | PRJNA438111 | 32062 | 210 | 3.535912 | 7.4254152 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 72.4 | 5.5e-13 | NR | MDE0839027.1 | 2212473 | g31437 | i0 | 100 | 0.471428571428571 | 33 | 0 | 47.1 | 0 | 1 | 99 | 275 | 307 | MDE0839027.1 fatty acid desaturase [Kiritimatiellia bacterium] | diamond | 99 | 72.4 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 27313711 | 27313711 | PRJNA438111_P_NODE_32383_length_210_cov_3.403315_g31758_i0 | PRJNA438111 | 32383 | 210 | 3.403315 | 7.1469615 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 70.1 | 2.25e-12 | NR | MBQ6007524.1 | 2212473 | g31758 | i0 | 86.8 | 9.45714285714286 | 38 | 5 | 54.3 | 0 | 209 | 96 | 91 | 128 | MBQ6007524.1 type III secretion system export apparatus subunit SctT [Kiritimatiellia bacterium] | diamond | 1986 | 70.1 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 27549776 | 27549776 | PRJNA438111_P_NODE_45404_length_187_cov_2.544304_g44779_i0 | PRJNA438111 | 45404 | 187 | 2.544304 | 4.75784848 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 69.7 | 5.26e-12 | NR | MFA6632188.1 | 2212473 | g44779 | i0 | 49.2 | 2.93582887700535 | 61 | 31 | 97.9 | 0 | 185 | 3 | 459 | 519 | MFA6632188.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Kiritimatiellia bacterium] | diamond | 549 | 69.7 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 27644840 | 27644840 | PRJNA438111_P_NODE_56844_length_174_cov_4.275862_g56219_i0 | PRJNA438111 | 56844 | 174 | 4.275862 | 7.43999988 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 85.1 | 1.16e-17 | NR | MDE0839028.1 | 2212473 | g56219 | i0 | 100 | 0.741379310344828 | 43 | 0 | 74.1 | 0 | 172 | 44 | 352 | 394 | MDE0839028.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Kiritimatiellia bacterium] | diamond | 129 | 85.1 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 28970741 | 28970741 | PRJNA438111_P_NODE_24308_length_220_cov_3.581152_g23683_i0 | PRJNA438111 | 24308 | 220 | 3.581152 | 7.8785344 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 144 | 3.68e-38 | NR | MDE0839434.1 | 2212473 | g23683 | i0 | 100 | 0.981818181818182 | 72 | 0 | 98.2 | 0 | 218 | 3 | 503 | 574 | MDE0839434.1 prolyl oligopeptidase family serine peptidase [Kiritimatiellia bacterium] | diamond | 216 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 29601862 | 29601862 | PRJNA438111_P_NODE_30610_length_210_cov_4.033149_g29985_i0 | PRJNA438111 | 30610 | 210 | 4.033149 | 8.4696129 | Kiritimatiellota bacterium | 2599938 | Bacteria | Bacteria | 69.7 | 7.28e-12 | NR | MCX7010480.1 | 2599938 | g29985 | i0 | 76.9 | 3.08571428571429 | 39 | 9 | 55.7 | 0 | 118 | 2 | 149 | 187 | MCX7010480.1 IS21 family transposase [Kiritimatiellota bacterium] | diamond | 648 | 69.7 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellota bacterium | |||||
| 29601902 | 29601902 | PRJNA438111_P_NODE_77150_length_160_cov_2.633588_g76525_i0 | PRJNA438111 | 77150 | 160 | 2.633588 | 4.2137408 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 68.9 | 6.45e-12 | NR | MCZ7592937.1 | 2212473 | g76525 | i0 | 57.7 | 2.925 | 52 | 22 | 97.5 | 0 | 158 | 3 | 351 | 402 | MCZ7592937.1 FAD-dependent oxidoreductase [Kiritimatiellia bacterium] | diamond | 468 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 30044258 | 30044258 | PRJNA438111_P_NODE_31731_length_210_cov_3.635359_g31106_i0 | PRJNA438111 | 31731 | 210 | 3.635359 | 7.6342539 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 119 | 1.8e-30 | NR | MDE0837962.1 | 2212473 | g31106 | i0 | 61.3 | 1.51428571428571 | 106 | 4 | 98.6 | 1 | 208 | 2 | 30 | 135 | MDE0837962.1 FAD-binding oxidoreductase [Kiritimatiellia bacterium] | diamond | 318 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 30423907 | 30423907 | PRJNA438111_P_NODE_64973_length_168_cov_1.021583_g64348_i0 | PRJNA438111 | 64973 | 168 | 1.021583 | 1.71625944 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 112 | 1.7e-30 | NR | MDE0840025.1 | 2212473 | g64348 | i0 | 100 | 0.982142857142857 | 55 | 0 | 98.2 | 0 | 167 | 3 | 43 | 97 | MDE0840025.1 hypothetical protein [Kiritimatiellia bacterium] | diamond | 165 | 112 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 30612939 | 30612939 | PRJNA438111_P_NODE_53273_length_178_cov_2.791946_g52648_i0 | PRJNA438111 | 53273 | 178 | 2.791946 | 4.96966388 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 120 | 6.2000000000000005e-30 | NR | MDE0839434.1 | 2212473 | g52648 | i0 | 100 | 0.97752808988764 | 58 | 0 | 97.8 | 0 | 176 | 3 | 322 | 379 | MDE0839434.1 prolyl oligopeptidase family serine peptidase [Kiritimatiellia bacterium] | diamond | 174 | 120 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 31845862 | 31845862 | PRJNA438111_P_NODE_43837_length_189_cov_2.412500_g43212_i0 | PRJNA438111 | 43837 | 189 | 2.4125 | 4.559625 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 130 | 1.99e-33 | NR | MDE0839589.1 | 2212473 | g43212 | i0 | 100 | 0.984126984126984 | 62 | 0 | 98.4 | 0 | 188 | 3 | 464 | 525 | MDE0839589.1 MMPL family transporter [Kiritimatiellia bacterium] | diamond | 186 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 31957145 | 31957145 | PRJNA438111_P_NODE_30837_length_210_cov_3.861878_g30212_i0 | PRJNA438111 | 30837 | 210 | 3.861878 | 8.1099438 | PVC group | 1783257 | Bacteria | Bacteria | 42 | 0.0437 | NR | HMO51476.1 | 2212473 | g30212 | i0 | 37 | 2.3 | 81 | 39 | 98.6 | 2 | 2 | 208 | 119 | 199 | HMO51476.1 glycosyltransferase [Kiritimatiellia bacterium] | diamond | 483 | 42.4 | 0.990566037735849 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 32573927 | 32573927 | PRJNA438111_P_NODE_27959_length_210_cov_6.248619_g27334_i0 | PRJNA438111 | 27959 | 210 | 6.248619 | 13.1220999 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 73.2 | 9.06e-15 | NR | MDE0839147.1 | 2212473 | g27334 | i0 | 100 | 0.471428571428571 | 33 | 0 | 47.1 | 0 | 209 | 111 | 57 | 89 | MDE0839147.1 hypothetical protein [Kiritimatiellia bacterium] | diamond | 99 | 73.2 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 32605171 | 32605171 | PRJNA438111_P_NODE_30920_length_210_cov_3.828729_g30295_i0 | PRJNA438111 | 30920 | 210 | 3.828729 | 8.0403309 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 57.8 | 7.37e-9 | NR | MDE0839617.1 | 2212473 | g30295 | i0 | 100 | 0.414285714285714 | 29 | 0 | 41.4 | 0 | 122 | 208 | 1 | 29 | MDE0839617.1 helix-turn-helix transcriptional regulator [Kiritimatiellia bacterium] | diamond | 87 | 57.8 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 32605172 | 32605172 | PRJNA438111_P_NODE_33160_length_209_cov_4.294444_g32535_i0 | PRJNA438111 | 33160 | 209 | 4.294444 | 8.97538796 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 85.5 | 2.07e-17 | NR | MDD4059100.1 | 2212473 | g32535 | i0 | 51.2 | 3.74641148325359 | 86 | 25 | 99 | 1 | 207 | 1 | 586 | 671 | MDD4059100.1 hypothetical protein [Kiritimatiellia bacterium] | diamond | 783 | 85.5 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;