RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA438111", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA438111 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26600785 26600785 PRJNA438111_P_NODE_32181_length_210_cov_3.502762_g31556_i0 PRJNA438111 32181 210 3.502762 7.3558002 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 57.8 1.07e-7   NR HEY6171864.1 2447898 g31556 i0 96.9 0.457142857142857 32 1 45.7 0 113 208 28 59 HEY6171864.1 electron transfer flavoprotein subunit alpha/FixB family protein [Candidatus Kapaibacterium sp.] diamond 96 57.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29759929 29759929 PRJNA438111_P_NODE_80371_length_157_cov_5.156250_g79746_i0 PRJNA438111 80371 157 5.15625 8.0953125 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 109 3.75e-26   NR HEY6171511.1 2447898 g79746 i0 100 0.974522292993631 51 0 97.5 0 155 3 420 470 HEY6171511.1 thiamine pyrophosphate-dependent enzyme [Candidatus Kapaibacterium sp.] diamond 153 109 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29886549 29886549 PRJNA438111_P_NODE_51791_length_179_cov_6.460000_g51166_i0 PRJNA438111 51791 179 6.46 11.5634 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 67 1.05e-11   NR HEY6171865.1 2447898 g51166 i0 100 0.553072625698324 33 0 55.3 0 178 80 171 203 HEY6171865.1 bifunctional nuclease family protein [Candidatus Kapaibacterium sp.] diamond 99 67 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31212914 31212914 PRJNA438111_P_NODE_31095_length_210_cov_3.779006_g30470_i0 PRJNA438111 31095 210 3.779006 7.9359126 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 70.9 5.29e-13   NR HEY6171865.1 2447898 g30470 i0 85 1.71428571428571 40 6 57.1 0 209 90 37 76 HEY6171865.1 bifunctional nuclease family protein [Candidatus Kapaibacterium sp.] diamond 360 70.9 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;