RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA438111", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA438111 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23386417 23386417 PRJNA438111_P_NODE_46619_length_185_cov_5.673077_g45994_i0 PRJNA438111 46619 185 5.673077 10.49519245 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 82.8 6.66e-17   NR MYE89607.1 2026781 g45994 i0 54.9 3.42162162162162 71 22 98.9 1 183 1 58 128 MYE89607.1 DUF5050 domain-containing protein [Candidatus Poribacteria bacterium] diamond 633 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30739407 30739407 PRJNA438111_P_NODE_69574_length_165_cov_1.044118_g68949_i0 PRJNA438111 69574 165 1.044118 1.7227947 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 53.9 8.37e-7   NR MDA1190384.1 2026781 g68949 i0 77.1 0.636363636363636 35 8 63.6 0 165 61 169 203 MDA1190384.1 ankyrin repeat domain-containing protein [Candidatus Poribacteria bacterium] diamond 105 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32415614 32415614 PRJNA438111_P_NODE_29979_length_210_cov_4.386740_g29354_i0 PRJNA438111 29979 210 4.38674 9.212154 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 51.2 2.43e-5   NR MBD3181551.1 2026781 g29354 i0 73.3 0.428571428571429 30 8 42.9 0 205 116 165 194 MBD3181551.1 response regulator [Candidatus Poribacteria bacterium] diamond 90 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;