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contig_metadata

18 rows where bioproject = "PRJNA438111", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 18 ✖

tax_clade 1

  • Apusozoa · 18 ✖

bioproject 1

  • PRJNA438111 · 18 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1708788 1708788 PRJNA438111_P_NODE_21282_length_233_cov_4.799020_g20657_i0 PRJNA438111 21282 233 4.79902 11.1817166 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 97.8 1.36e-21   NR XP_013757471.1 461836 g20657 i0 62.2 4.76394849785408 74 28 95.3 0 12 233 344 417 XP_013757471.1 26S proteasome non-ATPase regulatory subunit 2 [Thecamonas trahens ATCC 50062] diamond 1110 97.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
6812121 6812121 PRJNA438111_P_NODE_5526_length_420_cov_4.851662_g4945_i0 PRJNA438111 5526 420 4.851662 20.3769804 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 151 1.82e-41   NR XP_013760194.1 461836 g4945 i0 54.3 1 140 63 100 1 420 1 189 327 XP_013760194.1 G2/mitotic-specific cyclin-B [Thecamonas trahens ATCC 50062] diamond 420 151 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
11912612 11912612 PRJNA438111_P_NODE_19030_length_245_cov_2.069444_g18405_i0 PRJNA438111 19030 245 2.069444 5.0701378 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 117 2.38e-28   NR XP_013760135.1 461836 g18405 i0 70.4 0.991836734693878 81 24 99.2 0 1 243 365 445 XP_013760135.1 ABC transporter A family member 10 [Thecamonas trahens ATCC 50062] diamond 243 117 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24042712 24042712 PRJNA438111_P_NODE_8759_length_342_cov_1.769968_g8140_i0 PRJNA438111 8759 342 1.769968 6.05329056 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 134 4.0899999999999995e-35   NR XP_013760194.1 461836 g8140 i0 55.4 2.95614035087719 112 50 98.2 0 341 6 184 295 XP_013760194.1 G2/mitotic-specific cyclin-B [Thecamonas trahens ATCC 50062] diamond 1011 134 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26791212 26791212 PRJNA438111_P_NODE_61261_length_170_cov_4.397163_g60636_i0 PRJNA438111 61261 170 4.397163 7.4751771 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 98.2 1.98e-22   NR XP_013761379.1 461836 g60636 i0 75 0.988235294117647 56 14 98.8 0 2 169 98 153 XP_013761379.1 aspartate aminotransferase [Thecamonas trahens ATCC 50062] diamond 168 98.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27107364 27107364 PRJNA438111_P_NODE_47962_length_184_cov_2.251613_g47337_i0 PRJNA438111 47962 184 2.251613 4.14296792 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 62 1.55e-10   NR XP_013758367.1 461836 g47337 i0 65.8 0.619565217391304 38 13 62 0 3 116 72 109 XP_013758367.1 ubiquitin-conjugating enzyme E2 D/E [Thecamonas trahens ATCC 50062] diamond 114 62 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27739649 27739649 PRJNA438111_P_NODE_13224_length_286_cov_1.832685_g12599_i0 PRJNA438111 13224 286 1.832685 5.2414791 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 55.1 2.74e-6   NR XP_013756368.1 461836 g12599 i0 36.5 1.00699300699301 96 59 98.6 2 282 1 230 325 XP_013756368.1 solute carrier family 38 member 5 [Thecamonas trahens ATCC 50062] diamond 288 55.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27833965 27833965 PRJNA438111_P_NODE_4484_length_466_cov_5.739130_g3935_i0 PRJNA438111 4484 466 5.73913 26.7443458 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 75.9 4.14e-14   NR XP_013760554.1 461836 g3935 i0 37.5 0.824034334763948 128 72 77.9 3 445 83 16 142 XP_013760554.1 calmodulin [Thecamonas trahens ATCC 50062] diamond 384 75.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28560411 28560411 PRJNA438111_P_NODE_8427_length_347_cov_8.037736_g7810_i0 PRJNA438111 8427 347 8.037736 27.89094392 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 55.5 3.98e-6   NR XP_013756838.1 461836 g7810 i0 35.3 1.0028818443804 116 66 96.8 3 11 346 257 367 XP_013756838.1 bax inhibitor 1 [Thecamonas trahens ATCC 50062] diamond 348 55.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28671415 28671415 PRJNA438111_P_NODE_12367_length_294_cov_3.992453_g11742_i0 PRJNA438111 12367 294 3.992453 11.73781182 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.9 4.97e-4   NR XP_013754709.1 461836 g11742 i0 51.2 1.59183673469388 41 18 39.8 1 166 282 2053 2093 XP_013754709.1 uncharacterized protein AMSG_09323 [Thecamonas trahens ATCC 50062] diamond 468 48.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29065581 29065581 PRJNA438111_P_NODE_73428_length_162_cov_3.097744_g72803_i0 PRJNA438111 73428 162 3.097744 5.01834528 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.1 1.48e-17   NR XP_013760135.1 461836 g72803 i0 67.9 3.98148148148148 53 17 98.1 0 162 4 288 340 XP_013760135.1 ABC transporter A family member 10 [Thecamonas trahens ATCC 50062] diamond 645 85.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29791493 29791493 PRJNA438111_P_NODE_6451_length_391_cov_7.635359_g5854_i0 PRJNA438111 6451 391 7.635359 29.85425369 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 55.5 6.05e-6   NR XP_013761927.1 461836 g5854 i0 27.9 0.989769820971867 129 91 97.4 2 389 9 184 312 XP_013761927.1 delta-5 desaturase [Thecamonas trahens ATCC 50062] diamond 387 55.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29807886 29807886 PRJNA438111_P_NODE_50771_length_181_cov_1.684211_g50146_i0 PRJNA438111 50771 181 1.684211 3.04842191 Bangiophyceae 2797 Root_unresolved Root_unresolved 63.5 7.56e-10   NR XP_013757117.1 461836 g50146 i0 62 2.80110497237569 50 19 82.9 0 13 162 1554 1603 XP_013757117.1 uncharacterized protein AMSG_11960 [Thecamonas trahens ATCC 50062] diamond 507 63.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30075826 30075826 PRJNA438111_P_NODE_51392_length_180_cov_2.728477_g50767_i0 PRJNA438111 51392 180 2.728477 4.9112586 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 57 1.35e-7   NR XP_013756156.1 461836 g50767 i0 44.2 0.866666666666667 52 29 86.7 0 21 176 234 285 XP_013756156.1 metal tolerance protein [Thecamonas trahens ATCC 50062] diamond 156 57 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31972512 31972512 PRJNA438111_P_NODE_57178_length_174_cov_2.806897_g56553_i0 PRJNA438111 57178 174 2.806897 4.88400078 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 52.8 4.2e-6   NR XP_013762797.1 461836 g56553 i0 37.5 0.827586206896552 48 30 82.8 0 146 3 277 324 XP_013762797.1 syntaxin-binding protein 1 [Thecamonas trahens ATCC 50062] diamond 144 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32083775 32083775 PRJNA438111_P_NODE_458_length_1301_cov_8.518868_g312_i0 PRJNA438111 458 1301 8.518868 110.83047268 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 278 2.82e-84   NR XP_013753091.1 461836 g312 i0 38.1 2.00845503458878 433 260 99.2 6 1297 8 94 521 XP_013753091.1 pyruvate kinase [Thecamonas trahens ATCC 50062] diamond 2613 280 0.992857142857143 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32337159 32337159 PRJNA438111_P_NODE_3459_length_526_cov_5.358149_g2952_i0 PRJNA438111 3459 526 5.358149 28.18386374 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 129 2.3899999999999995e-32   NR XP_013760274.1 461836 g2952 i0 41.8 2.81178707224335 165 87 91.8 3 506 24 104 263 XP_013760274.1 deoxyribonuclease II family protein [Thecamonas trahens ATCC 50062] diamond 1479 129 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32573948 32573948 PRJNA438111_P_NODE_44559_length_188_cov_2.679245_g43934_i0 PRJNA438111 44559 188 2.679245 5.0369806 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 77 1.46e-14   NR XP_013760961.1 461836 g43934 i0 60.7 1.91489361702128 61 24 97.3 0 2 184 336 396 XP_013760961.1 peroxisomal acyl-coenzyme A oxidase 1 [Thecamonas trahens ATCC 50062] diamond 360 77 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;