RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA437204" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA437204 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1707612 1707612 PRJNA437204_P_NODE_47942_length_305_cov_1.301724_g47643_i0 PRJNA437204 47942 305 1.301724 3.9702582 Thermanaerovibrio acidaminovorans 81462 Bacteria Bacteria 82.4 3.63e-11   NTclustered gi|269099254|gb|CP001818.1| 525903 g47643 i0 94.34 15.2327868852459 53 3 17 0 169 221 901479 901427 Thermanaerovibrio acidaminovorans DSM 6589, complete genome blastn 4646 82.4 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Thermanaerovibrio Thermanaerovibrio acidaminovorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;