RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA437204" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA437204 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28118060 28118060 PRJNA437204_P_NODE_59545_length_282_cov_1.019139_g59246_i0 PRJNA437204 59545 282 1.019139 2.87397198 Ignavibacteria bacterium 2053306 Bacteria Bacteria 51.2 6.38e-5   NR MBD1210844.1 2053306 g59246 i0 40.2 2.03191489361702 97 37 98.9 4 4 282 46 125 MBD1210844.1 T9SS type A sorting domain-containing protein [Ignavibacteria bacterium] diamond 573 51.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30329191 30329191 PRJNA437204_P_NODE_62472_length_277_cov_1.122549_g62173_i0 PRJNA437204 62472 277 1.122549 3.10946073 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 84.3 6.89e-18   NR MCB9207625.1 2049428 g62173 i0 42.7 0.963898916967509 89 51 96.4 0 273 7 31 119 MCB9207625.1 ion transporter [Ignavibacteriales bacterium] diamond 267 84.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;