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contig_metadata

37 rows where bioproject = "PRJNA437204", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 37 ✖

tax_phylum 1

  • Chloroflexota · 37 ✖

tax_kingdom 1

bioproject 1

  • PRJNA437204 · 37 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1706903 1706903 PRJNA437204_P_NODE_128082_length_241_cov_0.916667_g127783_i0 PRJNA437204 128082 241 0.916667 2.20916747 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 178 3.43e-40   NTclustered gi|2874253725|emb|OY969567.1| 1672391 g127783 i0 86.792 1.33195020746888 159 21 66 0 30 188 2131312 2131470 MAG: uncultured Chloroflexia bacterium isolate MFD01561.bin.c.1 genome assembly, chromosome: 1 blastn 321 178 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
2982929 2982929 PRJNA437204_P_NODE_26443_length_372_cov_1.642140_g26144_i0 PRJNA437204 26443 372 1.64214 6.1087608 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 289 2.48e-73   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g26144 i0 81.183 10.9005376344086 372 58 99 9 1 369 1687539 1687177 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 4055 289 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
10636915 10636915 PRJNA437204_P_NODE_63089_length_276_cov_1.137931_g62790_i0 PRJNA437204 63089 276 1.137931 3.14068956 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 435 2.16e-117   NTclustered gi|2874253835|emb|OY969885.1| 1672391 g62790 i0 95.018 501.916666666667 281 6 100 5 1 276 2093553 2093830 MAG: uncultured Chloroflexia bacterium isolate MFD01275.bin.c.5 genome assembly, chromosome: 1 blastn 138529 435 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
13187044 13187044 PRJNA437204_P_NODE_81271_length_251_cov_0.865169_g80972_i0 PRJNA437204 81271 251 0.865169 2.17157419 Candidatus Promineifilum 1988031 Bacteria Bacteria 130 1.67e-33   NR WP_095041936.1 1806508 g80972 i0 77.1 19.7808764940239 83 19 99.2 0 250 2 186 268 WP_095041936.1 carboxyl transferase domain-containing protein [Candidatus Promineifilum breve] diamond 4965 130 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae Candidatus Promineifilum Candidatus Promineifilum breve
14461902 14461902 PRJNA437204_P_NODE_70352_length_264_cov_1.612565_g70053_i0 PRJNA437204 70352 264 1.612565 4.2571716 Bacillati 1783272 Bacteria Bacteria 150 1.86e-40   NR MDP9353758.1 2026724 g70053 i0 82.6 10.8636363636364 86 15 97.7 0 5 262 246 331 MDP9353758.1 glycoside hydrolase family 15 protein [Chloroflexota bacterium] diamond 2868 150 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
15118038 15118038 PRJNA437204_P_NODE_77872_length_253_cov_1.688889_g77573_i0 PRJNA437204 77872 253 1.688889 4.27288917 FCB group 1783270 Bacteria Bacteria 174 4.7e-39   NTclustered gi|2814788335|emb|OY760861.2| 3022862 g77573 i0 80 31.7628458498024 240 44 94 4 13 250 546847 547084 MAG: Tepidiformaceae bacterium isolate 815c9385-4915-413f-8b4b-d9ebc7d9cf62 genome assembly, chromosome: 1 blastn 8036 174 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae   Tepidiformaceae bacterium
15735696 15735696 PRJNA437204_P_NODE_65133_length_272_cov_1.608040_g64834_i0 PRJNA437204 65133 272 1.60804 4.3738688 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 374 4.6899999999999985e-99   NTclustered gi|2874254066|emb|OY970149.1| 1672391 g64834 i0 91.513 775.724264705882 271 23 99 0 1 271 566912 566642 MAG: uncultured Chloroflexia bacterium isolate MFD05747.bin.c.2 genome assembly, chromosome: 1 blastn 210997 374 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
17010711 17010711 PRJNA437204_P_NODE_87654_length_250_cov_0.870056_g87355_i0 PRJNA437204 87654 250 0.870056 2.17514 Tepidiformaceae bacterium 3022862 Bacteria Bacteria 54.7 0.006   NTclustered gi|2814788335|emb|OY760861.2| 3022862 g87355 i0 100 0.116 29 0 12 0 210 238 398416 398388 MAG: Tepidiformaceae bacterium isolate 815c9385-4915-413f-8b4b-d9ebc7d9cf62 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae   Tepidiformaceae bacterium
18284001 18284001 PRJNA437204_P_NODE_30715_length_354_cov_1.096085_g30416_i0 PRJNA437204 30715 354 1.096085 3.8801409 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 130 3.08e-32   NR MEE8336675.1 2026734 g30416 i0 53 2.93220338983051 115 49 97.5 2 8 352 273 382 MEE8336675.1 aminopeptidase N [Dehalococcoidia bacterium] diamond 1038 130 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
20216411 20216411 PRJNA437204_P_NODE_80776_length_251_cov_0.865169_g80477_i0 PRJNA437204 80776 251 0.865169 2.17157419 Bacillati 1783272 Bacteria Bacteria 60.1 7.46e-9   NR MCW5851908.1 2052143 g80477 i0 48.5 3.14342629482072 66 33 78.9 1 25 222 67 131 MCW5851908.1 hypothetical protein [Anaerolineae bacterium] diamond 789 60.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
26822874 26822874 PRJNA437204_P_NODE_71441_length_263_cov_1.068421_g71142_i0 PRJNA437204 71441 263 1.068421 2.80994723 Chloroflexota bacterium 2026724 Bacteria Bacteria 51.2 3.96e-5   NR MBI2767939.1 2026724 g71142 i0 48.2 1.27756653992395 56 26 60.5 1 159 1 8 63 MBI2767939.1 biotin--[acetyl-CoA-carboxylase] ligase [Chloroflexota bacterium] diamond 336 51.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
26871145 26871145 PRJNA437204_P_NODE_21061_length_404_cov_0.915408_g20762_i0 PRJNA437204 21061 404 0.915408 3.69824832 Bacillati 1783272 Bacteria Bacteria 53.9 4.52e-6   NR MBV9282004.1 2026724 g20762 i0 48.1 1.53712871287129 52 26 38.6 1 404 249 73 123 MBV9282004.1 hypothetical protein [Chloroflexota bacterium] diamond 621 53.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27075869 27075869 PRJNA437204_P_NODE_66502_length_270_cov_1.558376_g66203_i0 PRJNA437204 66502 270 1.558376 4.2076152 Anaerolineales bacterium 2073117 Bacteria Bacteria 46.2 0.00305   NR MCC6187675.1 2073117 g66203 i0 38.7 0.688888888888889 62 34 68.9 1 61 246 109 166 MCC6187675.1 WD40 repeat domain-containing protein [Anaerolineales bacterium] diamond 186 46.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
27613129 27613129 PRJNA437204_P_NODE_32984_length_345_cov_3.698529_g32685_i0 PRJNA437204 32984 345 3.698529 12.75992505 Chloroflexi bacterium RBG_16_69_14 1797661 Bacteria Bacteria 45.1 0.0163   NR OGO55017.1 1797661 g32685 i0 37.8 0.852173913043478 98 46 74.8 5 19 276 79 173 OGO55017.1 MAG: hypothetical protein A2Z32_13675 [Chloroflexi bacterium RBG_16_69_14] diamond 294 45.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexi bacterium RBG_16_69_14
27865418 27865418 PRJNA437204_P_NODE_50785_length_299_cov_1.022124_g50486_i0 PRJNA437204 50785 299 1.022124 3.05615076 Chloroflexota bacterium 2026724 Bacteria Bacteria 70.9 9.19e-12   NR MFV2062844.1 2026724 g50486 i0 45.1 1.02341137123746 102 44 90.3 2 26 295 258 359 MFV2062844.1 type I-U CRISPR-associated protein Csb2 [Chloroflexota bacterium] diamond 306 70.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28370693 28370693 PRJNA437204_P_NODE_68426_length_267_cov_1.587629_g68127_i0 PRJNA437204 68426 267 1.587629 4.23896943 Chloroflexota bacterium 2026724 Bacteria Bacteria 82.4 1.1e-16   NR MFC2031807.1 2026724 g68127 i0 44.3 1.97752808988764 88 47 96.6 1 264 7 62 149 MFC2031807.1 fumarylacetoacetate hydrolase family protein [Chloroflexota bacterium] diamond 528 82.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28465632 28465632 PRJNA437204_P_NODE_92086_length_249_cov_0.875000_g91787_i0 PRJNA437204 92086 249 0.875 2.17875 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.7 0.0392   NR HFE67564.1 2026724 g91787 i0 38.7 0.746987951807229 62 34 71.1 2 29 205 1 61 HFE67564.1 alpha-D-glucose phosphate-specific phosphoglucomutase [Chloroflexota bacterium] diamond 186 42.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28686762 28686762 PRJNA437204_P_NODE_35507_length_337_cov_1.526515_g35208_i0 PRJNA437204 35507 337 1.526515 5.14435555 Anaerolineales bacterium 2073117 Bacteria Bacteria 47 0.00375   NR NUM46156.1 2073117 g35208 i0 39.2 0.70326409495549 79 43 70.3 2 95 331 1477 1550 NUM46156.1 DUF4397 domain-containing protein [Anaerolineales bacterium] diamond 237 47 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28749649 28749649 PRJNA437204_P_NODE_128047_length_241_cov_0.916667_g127748_i0 PRJNA437204 128047 241 0.916667 2.20916747 Chloroflexia bacterium 2448782 Bacteria Bacteria 141 4.87e-39   NR MBA2469270.1 2448782 g127748 i0 73.8 0.995850622406639 80 21 99.6 0 240 1 113 192 MBA2469270.1 ABC transporter permease [Chloroflexia bacterium] diamond 240 141 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
29412588 29412588 PRJNA437204_P_NODE_74189_length_259_cov_1.010753_g73890_i0 PRJNA437204 74189 259 1.010753 2.61785027 Chloroflexota bacterium 2026724 Bacteria Bacteria 105 3.84e-24   NR MCP4357567.1 2026724 g73890 i0 61.6 5.97683397683398 86 33 99.6 0 1 258 174 259 MCP4357567.1 NAD(+) synthase [Chloroflexota bacterium] diamond 1548 105 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29444010 29444010 PRJNA437204_P_NODE_100990_length_247_cov_0.885057_g100691_i0 PRJNA437204 100990 247 0.885057 2.18609079 Anaerolineae bacterium 2052143 Bacteria Bacteria 74.3 2.9e-13   NR HFC12904.1 2052143 g100691 i0 54.8 0.88663967611336 73 31 88.7 2 3 221 138 208 HFC12904.1 FHA domain-containing protein [Anaerolineae bacterium] diamond 219 74.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29475572 29475572 PRJNA437204_P_NODE_96850_length_248_cov_0.880000_g96551_i0 PRJNA437204 96850 248 0.88 2.1824 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 42.7 0.0377   NR HEY7703008.1 2952938 g96551 i0 36.7 0.725806451612903 60 36 70.2 1 218 45 6 65 HEY7703008.1 cyclase family protein [Candidatus Limnocylindrales bacterium] diamond 180 42.7 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
29538892 29538892 PRJNA437204_P_NODE_102250_length_246_cov_0.890173_g101951_i0 PRJNA437204 102250 246 0.890173 2.18982558 Chloroflexia bacterium 2448782 Bacteria Bacteria 57.8 1.91e-7   NR MBA2451758.1 2448782 g101951 i0 42.5 2.91463414634146 80 20 97.6 1 2 241 443 496 MBA2451758.1 ABC transporter ATP-binding protein [Chloroflexia bacterium] diamond 717 57.8 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
29538917 29538917 PRJNA437204_P_NODE_67310_length_269_cov_1.219388_g67011_i0 PRJNA437204 67310 269 1.219388 3.28015372 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 45.4 0.00581   NR MCB9491752.1 2026734 g67011 i0 46 1.11524163568773 50 27 55.8 0 109 258 147 196 MCB9491752.1 primosomal protein N' [Dehalococcoidia bacterium] diamond 300 45.4 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
29664889 29664889 PRJNA437204_P_NODE_108950_length_245_cov_0.895349_g108651_i0 PRJNA437204 108950 245 0.895349 2.19360505 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 73.2 6.66e-13   NR MBQ6342723.1 2024896 g108651 i0 33.6 1.53061224489796 125 37 96.7 1 238 2 62 186 MBQ6342723.1 leucine-rich repeat protein [Anaerolineaceae bacterium] diamond 375 73.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
29918077 29918077 PRJNA437204_P_NODE_70051_length_265_cov_1.203125_g69752_i0 PRJNA437204 70051 265 1.203125 3.18828125 Anaerolineae bacterium 2052143 Bacteria Bacteria 57.4 3.79e-8   NR MCW5848612.1 2052143 g69752 i0 46.2 0.735849056603774 65 35 73.6 0 3 197 60 124 MCW5848612.1 profilin [Anaerolineae bacterium] diamond 195 57.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
30297574 30297574 PRJNA437204_P_NODE_84692_length_250_cov_0.870056_g84393_i0 PRJNA437204 84692 250 0.870056 2.17514 Anaerolineales bacterium 2073117 Bacteria Bacteria 45.1 0.006   NR HJW89309.1 2073117 g84393 i0 32.4 0.888 74 46 88.8 2 21 242 225 294 HJW89309.1 hypothetical protein [Anaerolineales bacterium] diamond 222 45.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30739321 30739321 PRJNA437204_P_NODE_22254_length_395_cov_7.888199_g21955_i0 PRJNA437204 22254 395 7.888199 31.15838605 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 66.2 1.09e-11   NR MEX2237236.1 2026734 g21955 i0 58.9 0.850632911392405 56 23 42.5 0 39 206 1 56 MEX2237236.1 CsbD family protein [Dehalococcoidia bacterium] diamond 336 66.2 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
30897549 30897549 PRJNA437204_P_NODE_52674_length_295_cov_1.040541_g52375_i0 PRJNA437204 52674 295 1.040541 3.06959595 Chloroflexota bacterium 2026724 Bacteria Bacteria 50.1 1.82e-4   NR MCY3887130.1 2026724 g52375 i0 31.3 1.13898305084746 112 59 95.6 3 284 3 559 670 MCY3887130.1 aminopeptidase N [Chloroflexota bacterium] diamond 336 50.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30960671 30960671 PRJNA437204_P_NODE_93614_length_248_cov_0.880000_g93315_i0 PRJNA437204 93614 248 0.88 2.1824 Caldilineaceae bacterium 2614250 Bacteria Bacteria 69.3 1.73e-11   NR MEZ4711093.1 2614250 g93315 i0 41.9 1.79032258064516 74 43 89.5 0 247 26 710 783 MEZ4711093.1 Ig-like domain-containing protein [Caldilineaceae bacterium] diamond 444 69.3 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
31434654 31434654 PRJNA437204_P_NODE_44796_length_312_cov_1.606695_g44497_i0 PRJNA437204 44796 312 1.606695 5.0128884 Chloroflexota bacterium 2026724 Bacteria Bacteria 82 9.76e-16   NR MAT09118.1 2026724 g44497 i0 39.8 0.990384615384615 103 62 99 0 3 311 166 268 MAT09118.1 hypothetical protein [Chloroflexota bacterium] diamond 309 82 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31593065 31593065 PRJNA437204_P_NODE_110896_length_244_cov_1.801170_g110597_i0 PRJNA437204 110896 244 1.80117 4.3948548 Caldilineaceae bacterium 2614250 Bacteria Bacteria 50.8 4.54e-5   NR MFN8470233.1 2614250 g110597 i0 42.4 0.725409836065574 59 26 72.5 1 188 12 154 204 MFN8470233.1 CAP domain-containing protein [Caldilineaceae bacterium] diamond 177 50.8 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
31877373 31877373 PRJNA437204_P_NODE_14737_length_462_cov_3.223650_g14438_i0 PRJNA437204 14737 462 3.22365 14.893263 Chloroflexota bacterium 2026724 Bacteria Bacteria 57 4.76e-7   NR MBM3152525.1 2026724 g14438 i0 34.5 0.714285714285714 110 70 71.4 2 39 368 26 133 MBM3152525.1 protease inhibitor I42 family protein [Chloroflexota bacterium] diamond 330 57 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32130897 32130897 PRJNA437204_P_NODE_72698_length_261_cov_1.228723_g72399_i0 PRJNA437204 72698 261 1.228723 3.20696703 Chloroflexota bacterium 2026724 Bacteria Bacteria 65.1 5.98e-10   NR MBI2887242.1 2026724 g72399 i0 55.6 2.52873563218391 72 28 81.6 2 16 228 237 305 MBI2887242.1 hypothetical protein [Chloroflexota bacterium] diamond 660 65.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32478970 32478970 PRJNA437204_P_NODE_82719_length_251_cov_0.865169_g82420_i0 PRJNA437204 82719 251 0.865169 2.17157419 Anaerolineales bacterium 2073117 Bacteria Bacteria 75.9 8.69e-14   NR MCA9900809.1 2073117 g82420 i0 51.3 0.908366533864542 76 36 90.8 1 231 4 2 76 MCA9900809.1 4-coumarate--CoA ligase family protein [Anaerolineales bacterium] diamond 228 75.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32636321 32636321 PRJNA437204_P_NODE_112940_length_244_cov_0.900585_g112641_i0 PRJNA437204 112940 244 0.900585 2.1974274 Chloroflexota bacterium 2026724 Bacteria Bacteria 67.4 7.87e-11   NR MEM8862004.1 2026724 g112641 i0 44.6 1.83196721311475 74 40 89.8 1 241 23 431 504 MEM8862004.1 PKD domain-containing protein [Chloroflexota bacterium] diamond 447 67.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32699436 32699436 PRJNA437204_P_NODE_14920_length_460_cov_1.682171_g14621_i0 PRJNA437204 14920 460 1.682171 7.7379866 Chloroflexota bacterium 2026724 Bacteria Bacteria 67.8 4.13e-10   NR MFC2021133.1 2026724 g14621 i0 38.7 0.606521739130435 93 51 60 2 456 181 168 255 MFC2021133.1 peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein [Chloroflexota bacterium] diamond 279 67.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;