RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA437204" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA437204 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23385045 23385045 PRJNA437204_P_NODE_56099_length_288_cov_1.302326_g55800_i0 PRJNA437204 56099 288 1.302326 3.75069888 uncultured Latescibacterota bacterium 199737 Bacteria Bacteria 52.8 0.027   NTclustered gi|2518556444|emb|OX638377.1| 199737 g55800 i0 100 0.0972222222222222 28 0 10 0 261 288 2417252 2417279 MAG: uncultured Latescibacteria bacterium isolate 96736c8f-e424-4c7a-a7cc-5c0d8e7e2df7 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium
28765923 28765923 PRJNA437204_P_NODE_125407_length_241_cov_0.916667_g125108_i0 PRJNA437204 125407 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 56.2 1.29e-7   NR MDP6701375.1 2053570 g125108 i0 42.2 4.64315352697095 64 35 79.7 1 45 236 12 73 MDP6701375.1 GFA family protein [Candidatus Latescibacterota bacterium] diamond 1119 56.6 0.992932862190813 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;