contig_metadata
5 rows where bioproject = "PRJNA437204" and tax_kingdom = "Pararnavirae"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1089833 | 1089833 | PRJNA437204_P_NODE_44121_length_314_cov_1.261411_g43822_i0 | PRJNA437204 | 44121 | 314 | 1.261411 | 3.96083054 | root | 1 | Root_unresolved | Root_unresolved | 542 | 1.43e-149 | NTclustered | gi|996270423|gb|KU324803.1| | 11786 | g43822 | i0 | 97.771 | 100 | 314 | 7 | 100 | 0 | 1 | 314 | 5353 | 5666 | Murine leukemia virus isolate CAST-X, complete genome | blastn | 31400 | 547 | 0.990859232175503 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 9360398 | 9360398 | PRJNA437204_P_NODE_27908_length_365_cov_2.592466_g27609_i0 | PRJNA437204 | 27908 | 365 | 2.592466 | 9.4625009 | Murine leukemia-related retroviruses | 99182 | Viruses | Viruses | 641 | 1.62e-179 | NTclustered | gi|320091412|gb|HQ154630.1| | 438045 | g27609 | i0 | 98.623 | 105.794520547945 | 363 | 4 | 100 | 1 | 4 | 365 | 8176 | 7814 | Xenotropic MuLV-related virus isolate xmlv15, complete genome | blastn | 38615 | 641 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Murine leukemia-related retroviruses | ||
| 28623529 | 28623529 | PRJNA437204_P_NODE_85967_length_250_cov_0.870056_g85668_i0 | PRJNA437204 | 85967 | 250 | 0.870056 | 2.17514 | Grapevine Roditis leaf discoloration-associated virus | 1471299 | Viruses | Viruses | 86.7 | 1.46e-17 | NR | AWD78011.1 | 1471299 | g85668 | i0 | 50 | 2.52 | 70 | 35 | 84 | 0 | 216 | 7 | 924 | 993 | AWD78011.1 ZnF, partial [Grapevine Roditis leaf discoloration-associated virus] | diamond | 630 | 86.7 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Badnavirus | Badnavirus decoloratiovitis | ||
| 31055672 | 31055672 | PRJNA437204_P_NODE_90335_length_249_cov_0.875000_g90036_i0 | PRJNA437204 | 90335 | 249 | 0.875 | 2.17875 | Dioscorea bacilliform AL virus 2 | 2448908 | Viruses | Viruses | 122 | 3.85e-30 | NR | AYH52628.1 | 2448908 | g90036 | i0 | 82.2 | 3.51807228915663 | 73 | 12 | 86.7 | 1 | 244 | 29 | 1477 | 1549 | AYH52628.1 ORF3 [Dioscorea bacilliform AL virus 2] | diamond | 876 | 122 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Badnavirus | Badnavirus betadioscoreae | ||
| 32383799 | 32383799 | PRJNA437204_P_NODE_82239_length_251_cov_0.865169_g81940_i0 | PRJNA437204 | 82239 | 251 | 0.865169 | 2.17157419 | Retroviridae sp. | 2681591 | Viruses | Viruses | 138 | 1.1e-35 | NR | QLI47668.1 | 2681591 | g81940 | i0 | 77.1 | 2.96414342629482 | 83 | 19 | 99.2 | 0 | 2 | 250 | 254 | 336 | QLI47668.1 MAG: pol polyprotein [Retroviridae sp.] | diamond | 744 | 138 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Retroviridae sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;