contig_metadata
8 rows where bioproject = "PRJNA437204", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17009915 | 17009915 | PRJNA437204_P_NODE_45734_length_310_cov_1.299578_g45435_i0 | PRJNA437204 | 45734 | 310 | 1.299578 | 4.0286918 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|2108172456|gb|CP070716.1| | 2026742 | g45435 | i0 | 92.105 | 0.12258064516129 | 38 | 2 | 12 | 1 | 247 | 283 | 1109343 | 1109306 | MAG: Gemmatimonadetes bacterium isolate bin486 chromosome | blastn | 38 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 22109503 | 22109503 | PRJNA437204_P_NODE_57738_length_285_cov_1.301887_g57439_i0 | PRJNA437204 | 57738 | 285 | 1.301887 | 3.71037795 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 165 | 3.2400000000000004e-36 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g57439 | i0 | 79.447 | 114.905263157895 | 253 | 36 | 88 | 11 | 20 | 271 | 1594714 | 1594951 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 32748 | 165 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 27392090 | 27392090 | PRJNA437204_P_NODE_122623_length_242_cov_0.911243_g122324_i0 | PRJNA437204 | 122623 | 242 | 0.911243 | 2.20520806 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 90.9 | 1.12e-19 | NR | HEX6558827.1 | 2910168 | g122324 | i0 | 74.1 | 1.4504132231405 | 58 | 15 | 71.9 | 0 | 174 | 1 | 204 | 261 | HEX6558827.1 hypothetical protein [Longimicrobiales bacterium] | diamond | 351 | 90.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 30819001 | 30819001 | PRJNA437204_P_NODE_20454_length_408_cov_1.379104_g20155_i0 | PRJNA437204 | 20454 | 408 | 1.379104 | 5.62674432 | Longimicrobium | 1804994 | Bacteria | Bacteria | 73.9 | 2.11e-13 | NR | WP_325312730.1 | 2029185 | g20155 | i0 | 37.6 | 3.86764705882353 | 125 | 71 | 86.8 | 1 | 406 | 53 | 48 | 172 | WP_325312730.1 YsnF/AvaK domain-containing protein [Longimicrobium sp.] | diamond | 1578 | 73.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 30929034 | 30929034 | PRJNA437204_P_NODE_50494_length_299_cov_1.725664_g50195_i0 | PRJNA437204 | 50494 | 299 | 1.725664 | 5.15973536 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 53.5 | 1.15e-5 | NR | MCH2466055.1 | 2026742 | g50195 | i0 | 52.9 | 0.511705685618729 | 51 | 24 | 51.2 | 0 | 6 | 158 | 16 | 66 | MCH2466055.1 ankyrin repeat domain-containing protein [Gemmatimonadota bacterium] | diamond | 153 | 53.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31181419 | 31181419 | PRJNA437204_P_NODE_108535_length_245_cov_0.895349_g108236_i0 | PRJNA437204 | 108535 | 245 | 0.895349 | 2.19360505 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 43.9 | 0.00633 | NR | HEX4934834.1 | 2026741 | g108236 | i0 | 42.9 | 1.40816326530612 | 49 | 28 | 60 | 0 | 209 | 63 | 17 | 65 | HEX4934834.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 345 | 43.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31655939 | 31655939 | PRJNA437204_P_NODE_20097_length_411_cov_0.911243_g19798_i0 | PRJNA437204 | 20097 | 411 | 0.911243 | 3.74520873 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 48.9 | 0.00155 | NR | MBX6331549.1 | 2026741 | g19798 | i0 | 41.7 | 0.525547445255474 | 72 | 42 | 52.6 | 0 | 281 | 66 | 208 | 279 | MBX6331549.1 Ig domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 216 | 48.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32825527 | 32825527 | PRJNA437204_P_NODE_109680_length_245_cov_0.895349_g109381_i0 | PRJNA437204 | 109680 | 245 | 0.895349 | 2.19360505 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 48.9 | 1.48e-4 | NR | HVE35983.1 | 2026741 | g109381 | i0 | 43.5 | 0.844897959183673 | 69 | 37 | 83.3 | 2 | 238 | 35 | 120 | 187 | HVE35983.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 207 | 48.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;