RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA437204", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA437204 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28718164 28718164 PRJNA437204_P_NODE_65367_length_272_cov_1.316583_g65068_i0 PRJNA437204 65367 272 1.316583 3.58110576 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 127 6.25e-33   NR HEY3305031.1 2838779 g65068 i0 73 3.92647058823529 89 24 98.2 0 268 2 227 315 HEY3305031.1 glycosyltransferase family 4 protein [Candidatus Binatia bacterium] diamond 1068 127 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29934478 29934478 PRJNA437204_P_NODE_127291_length_241_cov_0.916667_g126992_i0 PRJNA437204 127291 241 0.916667 2.20916747 Bacillati 1783272 Bacteria Bacteria 44.7 0.00751   NR HEX5607503.1 2838779 g126992 i0 38.6 2.19087136929461 44 27 54.8 0 73 204 235 278 HEX5607503.1 MmgE/PrpD family protein [Candidatus Binatia bacterium] diamond 528 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31023760 31023760 PRJNA437204_P_NODE_110275_length_245_cov_0.895349_g109976_i0 PRJNA437204 110275 245 0.895349 2.19360505 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 45.1 0.00592   NR HEX5019780.1 2838779 g109976 i0 48.5 3.93061224489796 33 17 40.4 0 167 69 113 145 HEX5019780.1 malto-oligosyltrehalose synthase [Candidatus Binatia bacterium] diamond 963 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31719421 31719421 PRJNA437204_P_NODE_84297_length_250_cov_0.870056_g83998_i0 PRJNA437204 84297 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 167 3.0999999999999996e-49   NR HET9917462.1 2838779 g83998 i0 91.5 5.88 82 7 98.4 0 246 1 39 120 HET9917462.1 hypothetical protein [Candidatus Binatia bacterium] diamond 1470 167 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32225754 32225754 PRJNA437204_P_NODE_87538_length_250_cov_0.870056_g87239_i0 PRJNA437204 87538 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 121 1.4499999999999998e-31   NR HEX9443419.1 2838779 g87239 i0 67.1 0.984 82 27 98.4 0 2 247 6 87 HEX9443419.1 hypothetical protein [Candidatus Binatia bacterium] diamond 246 121 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;