RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA437204", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA437204 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27676373 27676373 PRJNA437204_P_NODE_38164_length_329_cov_1.703125_g37865_i0 PRJNA437204 38164 329 1.703125 5.60328125 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 61.6 6.7e-9   NR NIM14904.1 2052149 g37865 i0 35.7 4.08510638297872 112 62 93 2 23 328 18 129 NIM14904.1 CAP domain-containing protein [Candidatus Aminicenantes bacterium] diamond 1344 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31529765 31529765 PRJNA437204_P_NODE_125936_length_241_cov_0.916667_g125637_i0 PRJNA437204 125936 241 0.916667 2.20916747 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 88.2 3.69e-18   NR NPV83522.1 2052149 g125637 i0 63.4 1.0207468879668 82 28 99.6 1 1 240 661 742 NPV83522.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Candidatus Aminicenantes bacterium] diamond 246 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;