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contig_metadata

16 rows where bioproject = "PRJNA437204", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 16 ✖

tax_clade 1

  • Apusozoa · 16 ✖

bioproject 1

  • PRJNA437204 · 16 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1708102 1708102 PRJNA437204_P_NODE_722_length_1463_cov_3.110072_g605_i0 PRJNA437204 722 1463 3.110072 45.50035336 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 557 8.419999999999998e-193   NR XP_013762089.1 461836 g605 i0 61.1 5.90772385509228 476 177 97.6 5 1429 2 12 479 XP_013762089.1 inositol-3-phosphate synthase [Thecamonas trahens ATCC 50062] diamond 8643 557 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
9360143 9360143 PRJNA437204_P_NODE_13808_length_474_cov_1.147132_g13509_i0 PRJNA437204 13808 474 1.147132 5.43740568 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 145 5.87e-37   NR XP_013761942.1 461836 g13509 i0 50 0.987341772151899 156 75 98.7 1 473 6 714 866 XP_013761942.1 MmpL efflux pump [Thecamonas trahens ATCC 50062] diamond 468 145 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10635441 10635441 PRJNA437204_P_NODE_103729_length_246_cov_0.890173_g103430_i0 PRJNA437204 103729 246 0.890173 2.18982558 Thecamonas trahens 529818 Root_unresolved Root_unresolved 176 1.26e-39   NTclustered gi|923130274|ref|XM_013903149.1| 461836 g103430 i0 88.356 44.719512195122 146 17 59 0 97 242 734 589 Thecamonas trahens ATCC 50062 14-3-3 family protein epsilon (AMSG_04940), partial mRNA blastn 11001 176 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
15735059 15735059 PRJNA437204_P_NODE_33393_length_344_cov_1.394834_g33094_i0 PRJNA437204 33393 344 1.394834 4.79822896 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 114 9.86e-27   NR XP_013754951.1 461836 g33094 i0 59.1 2.26744186046512 88 36 76.7 0 340 77 2812 2899 XP_013754951.1 uncharacterized protein AMSG_08995 [Thecamonas trahens ATCC 50062] diamond 780 114 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
17009865 17009865 PRJNA437204_P_NODE_42634_length_317_cov_2.500000_g42335_i0 PRJNA437204 42634 317 2.5 7.925 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 123 2.18e-31   NR XP_013760592.1 461836 g42335 i0 67.7 1.5993690851735 93 28 86.1 1 43 315 30 122 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 507 123 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23385804 23385804 PRJNA437204_P_NODE_9519_length_549_cov_0.834034_g9221_i0 PRJNA437204 9519 549 0.834034 4.57884666 Thecamonas trahens 529818 Root_unresolved Root_unresolved 318 4.82e-82   NTclustered gi|923129698|ref|XM_013902861.1| 461836 g9221 i0 79.104 14.2677595628415 469 92 85 6 60 525 141 606 Thecamonas trahens ATCC 50062 acyl-coa dehydrogenase (AMSG_04641), partial mRNA blastn 7833 318 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27170480 27170480 PRJNA437204_P_NODE_24802_length_381_cov_1.000000_g24503_i0 PRJNA437204 24802 381 1 3.81 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 96.3 3.01e-20   NR XP_013759829.1 461836 g24503 i0 45.2 1.97637795275591 124 65 96.9 3 2 370 273 394 XP_013759829.1 uncharacterized protein AMSG_03474 [Thecamonas trahens ATCC 50062] diamond 753 96.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27328883 27328883 PRJNA437204_P_NODE_26843_length_370_cov_1.814815_g26544_i0 PRJNA437204 26843 370 1.814815 6.7148155 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 49.7 1.65e-4   NR XP_013755301.1 461836 g26544 i0 36.4 0.624324324324324 77 48 62.4 1 355 125 41 116 XP_013755301.1 uncharacterized protein AMSG_08071 [Thecamonas trahens ATCC 50062] diamond 231 49.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27771059 27771059 PRJNA437204_P_NODE_19164_length_418_cov_2.823188_g18865_i0 PRJNA437204 19164 418 2.823188 11.80092584 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 86.7 1.57e-18   NR XP_013755301.1 461836 g18865 i0 38.7 0.889952153110048 124 74 87.6 1 3 368 8 131 XP_013755301.1 uncharacterized protein AMSG_08071 [Thecamonas trahens ATCC 50062] diamond 372 86.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28402327 28402327 PRJNA437204_P_NODE_64246_length_274_cov_1.169154_g63947_i0 PRJNA437204 64246 274 1.169154 3.20348196 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 66.6 2.05e-10   NR XP_013760714.1 461836 g63947 i0 53.4 0.635036496350365 58 26 62.4 1 173 3 41 98 XP_013760714.1 surfactant protein B containing protein [Thecamonas trahens ATCC 50062] diamond 174 66.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28497155 28497155 PRJNA437204_P_NODE_127407_length_241_cov_0.916667_g127108_i0 PRJNA437204 127407 241 0.916667 2.20916747 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 96.7 1.79e-21   NR XP_013752988.1 461836 g127108 i0 55.8 2.91286307053942 77 34 95.9 0 237 7 120 196 XP_013752988.1 N-acylethanolamine-hydrolyzing acid amidase [Thecamonas trahens ATCC 50062] diamond 702 96.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28654975 28654975 PRJNA437204_P_NODE_94307_length_248_cov_0.880000_g94008_i0 PRJNA437204 94307 248 0.88 2.1824 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 47.4 8.67e-4   NR XP_013759940.1 461836 g94008 i0 46.2 0.629032258064516 52 28 62.9 0 17 172 231 282 XP_013759940.1 uncharacterized protein AMSG_03594 [Thecamonas trahens ATCC 50062] diamond 156 47.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29317944 29317944 PRJNA437204_P_NODE_9769_length_543_cov_1.380851_g9471_i0 PRJNA437204 9769 543 1.380851 7.49802093 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 134 1.84e-33   NR XP_013755460.1 461836 g9471 i0 41.1 0.994475138121547 180 101 98.9 2 1 537 231 406 XP_013755460.1 N-acylsphingosine amidohydrolase [Thecamonas trahens ATCC 50062] diamond 540 134 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31909201 31909201 PRJNA437204_P_NODE_16817_length_440_cov_1.242507_g16518_i0 PRJNA437204 16817 440 1.242507 5.4670308 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 62.8 1.24e-8   NR XP_013762641.1 461836 g16518 i0 32.9 0.975 143 90 97.5 2 11 439 95 231 XP_013762641.1 glutathione S-transferase [Thecamonas trahens ATCC 50062] diamond 429 62.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32621378 32621378 PRJNA437204_P_NODE_75700_length_256_cov_1.683060_g75401_i0 PRJNA437204 75700 256 1.68306 4.3086336 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 59.3 5.98e-8   NR XP_013756459.1 461836 g75401 i0 45.8 2.80078125 83 35 97.3 2 6 254 313 385 XP_013756459.1 phenylalanine-4-hydroxylase [Thecamonas trahens ATCC 50062] diamond 717 59.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32888326 32888326 PRJNA437204_P_NODE_15780_length_450_cov_2.042440_g15481_i0 PRJNA437204 15780 450 2.04244 9.19098 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 86.3 3.26e-18   NR XP_013755301.1 461836 g15481 i0 43.6 0.78 117 64 76.7 1 4 348 15 131 XP_013755301.1 uncharacterized protein AMSG_08071 [Thecamonas trahens ATCC 50062] diamond 351 86.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;