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contig_metadata

23 rows where bioproject = "PRJNA437204", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 23 ✖

tax_clade 1

  • Amoebozoa · 23 ✖

bioproject 1

  • PRJNA437204 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
432600 432600 PRJNA437204_P_NODE_42641_length_317_cov_2.352459_g42342_i0 PRJNA437204 42641 317 2.352459 7.45729503 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 138 3.31e-40   NR XP_004334523.1 1257118 g42342 i0 78.5 8.62145110410095 79 17 74.8 0 22 258 16 94 XP_004334523.1 ribosomal protein s27, putative [Acanthamoeba castellanii str. Neff] diamond 2733 138 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5536011 5536011 PRJNA437204_P_NODE_27005_length_369_cov_2.824324_g26706_i0 PRJNA437204 27005 369 2.824324 10.42175556 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 126 2.0399999999999994e-24   NTclustered gi|470375091|ref|XM_004333111.1| 1257118 g26706 i0 84.848 2.91056910569106 132 12 36 6 46 176 1871 1747 Acanthamoeba castellanii str. Neff high molecular weight heat shock protein (ACA1_387860), partial mRNA blastn 1074 126 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8085339 8085339 PRJNA437204_P_NODE_15687_length_451_cov_2.296296_g15388_i0 PRJNA437204 15687 451 2.296296 10.35629496 Paramoeba branchiphila 308475 Discosea other_Eukaryota 381 4.909999999999999e-101   NTclustered gi|226347442|gb|FJ807261.1| 308475 g15388 i0 82.103 89.0088691796009 447 78 99 2 5 450 669 224 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 40143 381 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
11910353 11910353 PRJNA437204_P_NODE_106790_length_245_cov_0.895349_g106491_i0 PRJNA437204 106790 245 0.895349 2.19360505 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 128 3.4e-32   NR XP_004337289.1 1257118 g106491 i0 70.4 1.98367346938776 81 24 99.2 0 1 243 195 275 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 486 128 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11911302 11911302 PRJNA437204_P_NODE_41030_length_322_cov_0.919679_g40731_i0 PRJNA437204 41030 322 0.919679 2.96136638 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 283 9.85e-72   NTclustered gi|470484649|ref|XM_004344039.1| 1257118 g40731 i0 83.121 25.3633540372671 314 49 97 4 9 320 6630 6319 Acanthamoeba castellanii str. Neff PremRNA processing splicing factor 8, putative (ACA1_054320), partial mRNA blastn 8167 283 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16392742 16392742 PRJNA437204_P_NODE_80333_length_251_cov_0.865169_g80034_i0 PRJNA437204 80333 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87 2.7e-18   NR XP_004367908.1 1257118 g80034 i0 55.3 0.908366533864542 76 33 90.8 1 5 232 114 188 XP_004367908.1 enoylCoA hydratase/isomerase family domain containing protein [Acanthamoeba castellanii str. Neff] diamond 228 87 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19558135 19558135 PRJNA437204_P_NODE_24076_length_385_cov_0.987179_g23777_i0 PRJNA437204 24076 385 0.987179 3.80063915 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 209 2.06e-49   NTclustered gi|470416791|ref|XM_004336874.1| 1257118 g23777 i0 81.538 54.7558441558442 260 42 67 6 128 384 49 305 Acanthamoeba castellanii str. Neff ribosomal protein L44, putative (ACA1_325250), partial mRNA blastn 21081 209 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22109170 22109170 PRJNA437204_P_NODE_39838_length_325_cov_1.099206_g39539_i0 PRJNA437204 39838 325 1.099206 3.5724195 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92.4 1.93e-19   NR XP_004341325.1 1257118 g39539 i0 62.3 3.84923076923077 69 26 63.7 0 2 208 327 395 XP_004341325.1 ribosomal protein L3, putative [Acanthamoeba castellanii str. Neff] diamond 1251 92.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22766235 22766235 PRJNA437204_P_NODE_109978_length_245_cov_0.895349_g109679_i0 PRJNA437204 109978 245 0.895349 2.19360505 Acanthamoeba 5754 Discosea other_Eukaryota 102 2.789999999999999e-23   NR AAD09141.1 5755 g109679 i0 60.3 3.89387755102041 78 31 95.5 0 236 3 476 553 AAD09141.1 myosin I heavy chain kinase [Acanthamoeba castellanii] diamond 954 103 0.990291262135922 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26632733 26632733 PRJNA437204_P_NODE_99301_length_247_cov_0.885057_g99002_i0 PRJNA437204 99301 247 0.885057 2.18609079 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 127 1.13e-32   NR XP_004333080.1 1257118 g99002 i0 67.9 1.96761133603239 81 26 98.4 0 245 3 34 114 XP_004333080.1 glucose repression mediator protein, partial [Acanthamoeba castellanii str. Neff] diamond 486 127 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27377039 27377039 PRJNA437204_P_NODE_61403_length_278_cov_2.253659_g61104_i0 PRJNA437204 61403 278 2.253659 6.26517202 root 1 Root_unresolved Root_unresolved 54.7 3.45e-6   NR XP_004345960.1 1257118 g61104 i0 27.8 5.83812949640288 90 65 97.1 0 8 277 23 112 XP_004345960.1 erythronate4-phosphate dehydrogenase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 1623 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27534671 27534671 PRJNA437204_P_NODE_8323_length_578_cov_2.532673_g8027_i0 PRJNA437204 8323 578 2.532673 14.63884994 Viridiplantae 33090 Discosea other_Eukaryota 105 3.0699999999999998e-24   NR XP_004349741.1 1257118 g8027 i0 49.1 2.05017301038062 108 53 56.1 1 459 136 31 136 XP_004349741.1 uncharacterized protein ACA1_034610 [Acanthamoeba castellanii str. Neff] diamond 1185 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27739625 27739625 PRJNA437204_P_NODE_67324_length_269_cov_1.178571_g67025_i0 PRJNA437204 67324 269 1.178571 3.17035599 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 107 5.77e-26   NR XP_004347098.1 1257118 g67025 i0 57.3 0.992565055762082 89 38 99.3 0 1 267 112 200 XP_004347098.1 GDSLlike lipase/acylhydrolase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 267 107 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28244277 28244277 PRJNA437204_P_NODE_53946_length_292_cov_1.401826_g53647_i0 PRJNA437204 53946 292 1.401826 4.09333192 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.2 0.00382   NR XP_004339258.1 1257118 g53647 i0 73.1 0.267123287671233 26 7 26.7 0 159 236 225 250 XP_004339258.1 dihydropyrimidinase [Acanthamoeba castellanii str. Neff] diamond 78 46.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28275939 28275939 PRJNA437204_P_NODE_90926_length_249_cov_0.875000_g90627_i0 PRJNA437204 90926 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 83.6 1.76e-16   NR XP_004335628.1 1257118 g90627 i0 46.6 0.879518072289157 73 39 88 0 240 22 18 90 XP_004335628.1 vacuolar protein sortingassociated protein 11, putative [Acanthamoeba castellanii str. Neff] diamond 219 83.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28370694 28370694 PRJNA437204_P_NODE_68686_length_267_cov_1.190722_g68387_i0 PRJNA437204 68686 267 1.190722 3.17922774 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.9 7.29e-8   NR XP_004356560.1 1257118 g68387 i0 56.3 0.539325842696629 48 21 53.9 0 265 122 233 280 XP_004356560.1 nadph-dependent carbonyl reductase family protein [Acanthamoeba castellanii str. Neff] diamond 144 58.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29412592 29412592 PRJNA437204_P_NODE_82109_length_251_cov_0.865169_g81810_i0 PRJNA437204 82109 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92.4 1.38e-19   NR XP_004338807.1 1257118 g81810 i0 53.6 2.98804780876494 84 37 98 1 248 3 508 591 XP_004338807.1 myosin head (motor domain) domain containing protein [Acanthamoeba castellanii str. Neff] diamond 750 92.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29886497 29886497 PRJNA437204_P_NODE_5291_length_689_cov_5.074675_g5004_i0 PRJNA437204 5291 689 5.074675 34.96451075 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 71.6 6.98e-12   NR XP_004349605.1 1257118 g5004 i0 31.6 0.496371552975327 114 70 48.3 2 684 352 23 131 XP_004349605.1 uncharacterized protein ACA1_142080 [Acanthamoeba castellanii str. Neff] diamond 342 71.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31782496 31782496 PRJNA437204_P_NODE_49337_length_302_cov_1.222707_g49038_i0 PRJNA437204 49337 302 1.222707 3.69257514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.5 7.37e-19   NR XP_004348720.1 1257118 g49038 i0 51.2 0.814569536423841 82 34 80.5 2 5 247 54 130 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 246 85.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32004214 32004214 PRJNA437204_P_NODE_96698_length_248_cov_0.880000_g96399_i0 PRJNA437204 96698 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 115 7.25e-28   NR XP_004332827.1 1257118 g96399 i0 64.6 0.991935483870968 82 29 99.2 0 248 3 584 665 XP_004332827.1 cycloartenol synthase [Acanthamoeba castellanii str. Neff] diamond 246 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32320885 32320885 PRJNA437204_P_NODE_55499_length_289_cov_1.402778_g55200_i0 PRJNA437204 55499 289 1.402778 4.05402842 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 118 5.709999999999999e-31   NR XP_004336066.1 1257118 g55200 i0 58.9 0.986159169550173 95 39 98.6 0 288 4 36 130 XP_004336066.1 NAD(P)H:quinone oxidoreductase, type IV, putative [Acanthamoeba castellanii str. Neff] diamond 285 118 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32573894 32573894 PRJNA437204_P_NODE_69559_length_265_cov_10.843750_g69260_i0 PRJNA437204 69559 265 10.84375 28.7359375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 7.699999999999998e-25   NR XP_004339691.1 1257118 g69260 i0 80 3.15849056603774 55 11 62.3 0 246 82 1 55 XP_004339691.1 ribosomal S29 subunit [Acanthamoeba castellanii str. Neff] diamond 837 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32778706 32778706 PRJNA437204_P_NODE_121700_length_242_cov_0.911243_g121401_i0 PRJNA437204 121700 242 0.911243 2.20520806 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 4.9000000000000005e-27   NR XP_004339252.1 1257118 g121401 i0 63.3 1.94628099173554 79 29 97.9 0 238 2 20 98 XP_004339252.1 ribosomal protein L13e, putative [Acanthamoeba castellanii str. Neff] diamond 471 108 0.990740740740741 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;