RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA436017" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA436017 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
430742 430742 PRJNA436017_P_NODE_19761_length_184_cov_1.170068_g19463_i0 PRJNA436017 19761 184 1.170068 2.15292512 brine shrimp partiti-like virus 4 2900391 Viruses Viruses 335 1.3899999999999996e-87   NTclustered gi|2209094901|gb|OL472522.1| 2900391 g19463 i0 99.457 13 184 1 100 0 1 184 1149 966 MAG: Brine shrimp partiti-like virus 4 isolate SD/17-18 RNA-dependent RNA polymerase gene, complete cds blastn 2392 335 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 4
6808410 6808410 PRJNA436017_P_NODE_18186_length_192_cov_1.554839_g17888_i0 PRJNA436017 18186 192 1.554839 2.98529088 brine shrimp iflavirus 3 2900464 Viruses Viruses 344 2.44e-90   NTclustered gi|2209094748|gb|OL472446.1| 2900464 g17888 i0 98.958 11 192 2 100 0 1 192 5487 5678 MAG: Brine shrimp iflavirus 3 isolate VIE/10 RNA-dependent RNA polymerase gene, complete cds blastn 2112 344 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
9358896 9358896 PRJNA436017_P_NODE_22508_length_172_cov_1.600000_g22210_i0 PRJNA436017 22508 172 1.6 2.752 brine shrimp iflavirus 3 2900464 Viruses Viruses 318 1.2899999999999999e-82   NTclustered gi|2209094754|gb|OL472449.1| 2900464 g22210 i0 100 11 172 0 100 0 1 172 5016 5187 MAG: Brine shrimp iflavirus 3 isolate NM/94-18 RNA-dependent RNA polymerase gene, complete cds blastn 1892 318 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
13184374 13184374 PRJNA436017_P_NODE_17511_length_196_cov_1.578616_g17213_i0 PRJNA436017 17511 196 1.578616 3.09408736 brine shrimp partiti-like virus 4 2900391 Viruses Viruses 357 3.2099999999999996e-94   NTclustered gi|2209094901|gb|OL472522.1| 2900391 g17213 i0 99.49 13 196 1 100 0 1 196 660 465 MAG: Brine shrimp partiti-like virus 4 isolate SD/17-18 RNA-dependent RNA polymerase gene, complete cds blastn 2548 357 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 4
24656979 24656979 PRJNA436017_P_NODE_15000_length_214_cov_2.983051_g14702_i0 PRJNA436017 15000 214 2.983051 6.38372914 Sopidub virus 3131684 Viruses Viruses 108 3.97e-19   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g14702 i0 93.243 1.39719626168224 74 3 34 1 137 208 2139 2212 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 299 108 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus
24657144 24657144 PRJNA436017_P_NODE_23760_length_167_cov_1.907692_g23462_i0 PRJNA436017 23760 167 1.907692 3.18584564 brine shrimp partiti-like virus 4 2900391 Viruses Viruses 309 7.53e-80   NTclustered gi|2209094901|gb|OL472522.1| 2900391 g23462 i0 100 13 167 0 100 0 1 167 1173 1339 MAG: Brine shrimp partiti-like virus 4 isolate SD/17-18 RNA-dependent RNA polymerase gene, complete cds blastn 2171 309 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   brine shrimp partiti-like virus 4
30928986 30928986 PRJNA436017_P_NODE_26074_length_160_cov_0.926829_g25776_i0 PRJNA436017 26074 160 0.926829 1.4829264 Plasmopara viticola lesion associated Partitivirus 8 2692006 Viruses Viruses 56.2 2.11e-7   NR QHD64792.1 2692006 g25776 i0 52.3 0.825 44 21 82.5 0 10 141 271 314 QHD64792.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated Partitivirus 8] diamond 132 56.2 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Plasmopara viticola lesion associated Partitivirus 8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;