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contig_metadata

15 rows where bioproject = "PRJNA436017" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA436017 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1089003 1089003 PRJNA436017_P_NODE_16641_length_202_cov_1.339394_g16343_i0 PRJNA436017 16641 202 1.339394 2.70557588 Naegleria 5761 Heterolobosea other_Eukaryota 374 3.3e-99   NTclustered gi|2618963742|gb|OR769034.1| 5762 g16343 i0 100 31.8168316831683 202 0 100 0 1 202 4069 3868 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 6427 374 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2364512 2364512 PRJNA436017_P_NODE_25482_length_161_cov_2.314516_g25184_i0 PRJNA436017 25482 161 2.314516 3.72637076 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.1 2.22e-5   NTclustered gi|290978632|ref|XM_002671994.1| 5762 g25184 i0 100 1.02484472049689 33 0 20 0 91 123 3876 3844 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_81362), partial mRNA blastn 165 62.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2981499 2981499 PRJNA436017_P_NODE_23663_length_168_cov_1.137405_g23365_i0 PRJNA436017 23663 168 1.137405 1.9108404 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 56.5 0.001   NTclustered gi|2031933458|emb|OD956744.1| 5763 g23365 i0 100 0.178571428571429 30 0 18 0 130 159 183 154 Naegleria fowleri Karachi_NF001 strain blastn 30 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
2981625 2981625 PRJNA436017_P_NODE_3803_length_477_cov_2.838636_g3517_i0 PRJNA436017 3803 477 2.838636 13.54029372 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 804 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g3517 i0 97.071 40.9224318658281 478 12 100 2 1 477 2821 2345 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 19520 804 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
2981707 2981707 PRJNA436017_P_NODE_7863_length_315_cov_4.237410_g7566_i0 PRJNA436017 7863 315 4.23741 13.3478415 Allovahlkampfia sp. SG-2014c 1445708 Heterolobosea other_Eukaryota 534 2.4e-147   NTclustered gi|574484036|gb|KF547915.1| 1445708 g7566 i0 97.17 96.1396825396825 318 6 100 2 1 315 922 1239 Allovahlkampfia sp. SG-2014c 18S ribosomal RNA gene, partial sequence blastn 30284 534 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. SG-2014c
6808669 6808669 PRJNA436017_P_NODE_4326_length_444_cov_3.302211_g4034_i0 PRJNA436017 4326 444 3.302211 14.66181684 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 793 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g4034 i0 98.874 51.1981981981982 444 5 100 0 1 444 3575 3132 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22732 793 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
8083958 8083958 PRJNA436017_P_NODE_16027_length_206_cov_1.585799_g15729_i0 PRJNA436017 16027 206 1.585799 3.26674594 Heterolobosea sp. HGG1 1237086 Heterolobosea other_Eukaryota 307 3.4800000000000004e-79   NTclustered gi|407750695|gb|JX441981.1| 1237086 g15729 i0 93.659 25.961165048543705 205 13 99 0 1 205 12 216 Heterolobosea sp. HGG1 18S ribosomal RNA gene, partial sequence blastn 5348 307 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. HGG1
8084057 8084057 PRJNA436017_P_NODE_21327_length_177_cov_1.357143_g21029_i0 PRJNA436017 21327 177 1.357143 2.40214311 Naegleria clarki 36333 Heterolobosea other_Eukaryota 305 1.04e-78   NTclustered gi|2651357780|gb|PP174296.1| 36333 g21029 i0 97.74 46.5536723163842 177 4 100 0 1 177 2405 2581 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8240 305 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
8084114 8084114 PRJNA436017_P_NODE_2467_length_602_cov_7.205310_g2212_i0 PRJNA436017 2467 602 7.20531 43.3759662 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 824 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g2212 i0 92.295 21.6428571428571 584 40 97 5 1 583 3785 4364 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13029 824 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
11909498 11909498 PRJNA436017_P_NODE_1750_length_714_cov_8.629247_g1527_i0 PRJNA436017 1750 714 8.629247 61.61282358 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 824 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g1527 i0 87.587 16.2170868347339 717 82 99 7 2 714 2044 2757 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11579 824 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12567881 12567881 PRJNA436017_P_NODE_23470_length_168_cov_1.931298_g23172_i0 PRJNA436017 23470 168 1.931298 3.24458064 Naegleria 5761 Heterolobosea other_Eukaryota 311 2.11e-80   NTclustered gi|2618963742|gb|OR769034.1| 5762 g23172 i0 100 83.9761904761905 168 0 100 0 1 168 3350 3183 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 14108 311 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24040801 24040801 PRJNA436017_P_NODE_17359_length_197_cov_1.581250_g17061_i0 PRJNA436017 17359 197 1.58125 3.1150625 Naegleria 5761 Heterolobosea other_Eukaryota 364 1.929999999999999e-96   NTclustered gi|2618963742|gb|OR769034.1| 5762 g17061 i0 100 10.2081218274112 197 0 100 0 1 197 5552 5748 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2011 364 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
25315261 25315261 PRJNA436017_P_NODE_5100_length_403_cov_3.035519_g4804_i0 PRJNA436017 5100 403 3.035519 12.23314157 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 640 6.48e-179   NTclustered gi|2864358978|gb|PQ678835.1| 912115 g4804 i0 95.309 56.5930521091811 405 15 100 4 1 403 155 557 Allovahlkampfia palustris isolate ATCCPRA325 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22807 645 0.992248062015504 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia palustris
29128724 29128724 PRJNA436017_P_NODE_14769_length_216_cov_2.039106_g14471_i0 PRJNA436017 14769 216 2.039106 4.40446896 Acrasis kona 1008807 Heterolobosea other_Eukaryota 51.6 3.49e-6   NR KAL0490923.1 1008807 g14471 i0 41 1.76388888888889 61 28 84.7 1 183 1 13 65 KAL0490923.1 ribosomal protein S20 [Acrasis kona] diamond 381 51.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32699399 32699399 PRJNA436017_P_NODE_19320_length_186_cov_1.563758_g19022_i0 PRJNA436017 19320 186 1.563758 2.90858988 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 45.1 0.0027   NR XP_044547693.1 51637 g19022 i0 44.4 6.14516129032258 45 24 71 1 133 2 1708 1752 XP_044547693.1 uncharacterized protein C9374_005806 [Naegleria lovaniensis] diamond 1143 45.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;