contig_metadata
14 rows where bioproject = "PRJNA436017" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3640093 | 3640093 | PRJNA436017_P_NODE_22683_length_171_cov_2.119403_g22385_i0 | PRJNA436017 | 22683 | 171 | 2.119403 | 3.62417913 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 278 | 2.17e-70 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g22385 | i0 | 95.906 | 215.59649122807 | 171 | 7 | 100 | 0 | 1 | 171 | 1250886 | 1250716 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 36867 | 278 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 6192034 | 6192034 | PRJNA436017_P_NODE_13465_length_228_cov_2.874346_g13167_i0 | PRJNA436017 | 13465 | 228 | 2.874346 | 6.55350888 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 363 | 8.269999999999999e-96 | NTclustered | gi|2082223669|gb|CP075585.1| | 225148 | g13167 | i0 | 95.575 | 164.833333333333 | 226 | 10 | 99 | 0 | 1 | 226 | 1018267 | 1018042 | Candidatus Rhabdochlamydia porcellionis strain 15C chromosome, complete genome | blastn | 37582 | 363 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Candidatus Rhabdochlamydia | Candidatus Rhabdochlamydia porcellionis | |
| 10017199 | 10017199 | PRJNA436017_P_NODE_3468_length_502_cov_4.881720_g3187_i0 | PRJNA436017 | 3468 | 502 | 4.88172 | 24.5062344 | Chlamydiia | 204429 | Bacteria | Bacteria | 610 | 6.4599999999999996e-170 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g3187 | i0 | 88.934 | 183.03187250996 | 497 | 51 | 99 | 4 | 1 | 495 | 2363921 | 2364415 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 91882 | 614 | 0.993485342019544 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 11909743 | 11909743 | PRJNA436017_P_NODE_4770_length_419_cov_4.604712_g4474_i0 | PRJNA436017 | 4770 | 419 | 4.604712 | 19.29374328 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 640 | 6.769999999999999e-179 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g4474 | i0 | 94.272 | 159.847255369928 | 419 | 22 | 99 | 2 | 2 | 419 | 2361202 | 2361619 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 66976 | 640 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 13184621 | 13184621 | PRJNA436017_P_NODE_451_length_1268_cov_5.787165_g371_i0 | PRJNA436017 | 451 | 1268 | 5.787165 | 73.3812522 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 1598 | 0 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g371 | i0 | 89.737 | 126.126971608833 | 1257 | 119 | 99 | 10 | 10 | 1261 | 2362519 | 2363770 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 159929 | 1598 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 13842560 | 13842560 | PRJNA436017_P_NODE_22691_length_171_cov_1.985075_g22393_i0 | PRJNA436017 | 22691 | 171 | 1.985075 | 3.39447825 | Chlamydiia | 204429 | Bacteria | Bacteria | 148 | 1.78e-31 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g22393 | i0 | 82.558 | 135.046783625731 | 172 | 26 | 100 | 4 | 1 | 171 | 574 | 742 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 23093 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 15733557 | 15733557 | PRJNA436017_P_NODE_373_length_1357_cov_8.090152_g127_i3 | PRJNA436017 | 373 | 1357 | 8.090152 | 109.78336264000001 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 1339 | 0 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g127 | i3 | 92.537 | 90.6610169491525 | 938 | 64 | 69 | 6 | 422 | 1357 | 2363978 | 2363045 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 123027 | 1339 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 15733601 | 15733601 | PRJNA436017_P_NODE_6373_length_354_cov_3.173502_g6077_i0 | PRJNA436017 | 6373 | 354 | 3.173502 | 11.23419708 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 499 | 9.95e-137 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g6077 | i0 | 92.09 | 182.158192090395 | 354 | 28 | 100 | 0 | 1 | 354 | 1250799 | 1250446 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 64484 | 499 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 15733607 | 15733607 | PRJNA436017_P_NODE_6593_length_348_cov_5.475884_g6296_i0 | PRJNA436017 | 6593 | 348 | 5.475884 | 19.05607632 | Neochlamydia sp. S13 | 1353976 | Bacteria | Bacteria | 425 | 1.69e-114 | NTclustered | gi|1550189844|dbj|AP017977.1| | 1353976 | g6296 | i0 | 89.017 | 140.229885057471 | 346 | 35 | 99 | 2 | 5 | 348 | 792373 | 792029 | Neochlamydia sp. S13 DNA, complete genome | blastn | 48800 | 425 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia sp. S13 | |
| 20215206 | 20215206 | PRJNA436017_P_NODE_13756_length_225_cov_3.000000_g13458_i0 | PRJNA436017 | 13756 | 225 | 3 | 6.75 | Parachlamydia | 83551 | Bacteria | Bacteria | 294 | 3.01e-75 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g13458 | i0 | 90.308 | 134.773333333333 | 227 | 19 | 100 | 2 | 1 | 225 | 1055 | 830 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 30324 | 294 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 22765909 | 22765909 | PRJNA436017_P_NODE_10378_length_267_cov_3.186957_g10080_i0 | PRJNA436017 | 10378 | 267 | 3.186957 | 8.50917519 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 313 | 1.02e-80 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g10080 | i0 | 88.104 | 141.022471910112 | 269 | 24 | 99 | 7 | 2 | 267 | 1251315 | 1251052 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 37653 | 313 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 22766050 | 22766050 | PRJNA436017_P_NODE_4598_length_429_cov_5.647959_g4302_i0 | PRJNA436017 | 4598 | 429 | 5.647959 | 24.22974411 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 693 | 0 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g4302 | i0 | 95.814 | 164.331002331002 | 430 | 16 | 100 | 2 | 1 | 429 | 1250299 | 1250727 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 70498 | 693 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 23383148 | 23383148 | PRJNA436017_P_NODE_3379_length_509_cov_5.781780_g3100_i0 | PRJNA436017 | 3379 | 509 | 5.78178 | 29.4292602 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 669 | 0 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g3100 | i0 | 90.392 | 404.471512770138 | 510 | 47 | 100 | 2 | 1 | 509 | 2363921 | 2364429 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 205876 | 669 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 27771016 | 27771016 | PRJNA436017_P_NODE_18904_length_188_cov_2.013245_g18606_i0 | PRJNA436017 | 18904 | 188 | 2.013245 | 3.7849006 | Candidatus Protochlamydia amoebophila | 362787 | Bacteria | Bacteria | 54.7 | 2.58e-8 | NR | MBS4163025.1 | 362787 | g18606 | i0 | 68.6 | 0.558510638297872 | 35 | 11 | 55.9 | 0 | 107 | 3 | 4 | 38 | MBS4163025.1 hypothetical protein [Candidatus Protochlamydia amoebophila] | diamond | 105 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;