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contig_metadata

24 rows where bioproject = "PRJNA436017", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 24 ✖

tax_phylum 1

  • Acidobacteriota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA436017 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1705898 1705898 PRJNA436017_P_NODE_8482_length_301_cov_3.840909_g8184_i0 PRJNA436017 8482 301 3.840909 11.56113609 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 379 1.13e-100   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g8184 i0 89.369 268.046511627907 301 32 100 0 1 301 3559317 3559017 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 80682 379 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
2981551 2981551 PRJNA436017_P_NODE_26343_length_159_cov_1.237705_g26045_i0 PRJNA436017 26343 159 1.237705 1.96795095 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 278 2e-70   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g26045 i0 98.125 99.7232704402516 160 1 100 2 1 159 635379 635537 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 15856 278 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
5534428 5534428 PRJNA436017_P_NODE_17505_length_196_cov_1.685535_g17207_i0 PRJNA436017 17505 196 1.685535 3.3036486 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 95.3 2.78e-15   NTclustered gi|2874253692|emb|OY969418.1| 171953 g17207 i0 86.022 5.01020408163265 93 7 46 6 2 91 498722 498633 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 982 95.3 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
10634463 10634463 PRJNA436017_P_NODE_10009_length_273_cov_1.665254_g9711_i0 PRJNA436017 10009 273 1.665254 4.54614342 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 483 7.5e-132   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g9711 i0 98.535 68.2564102564103 273 4 100 0 1 273 634685 634957 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 18634 483 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
10634923 10634923 PRJNA436017_P_NODE_8609_length_298_cov_6.015326_g8311_i0 PRJNA436017 8609 298 6.015326 17.92567148 Acidobacteriota bacterium 1978231 Bacteria Bacteria 285 2.51e-72   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g8311 i0 84.175 238.130872483221 297 43 99 4 4 298 3301039 3300745 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 70963 285 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
11909575 11909575 PRJNA436017_P_NODE_21950_length_174_cov_2.270073_g21652_i0 PRJNA436017 21950 174 2.270073 3.94992702 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 322 1.01e-83   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g21652 i0 100 8.52873563218391 174 0 100 0 1 174 635067 635240 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 1484 322 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
14459420 14459420 PRJNA436017_P_NODE_12212_length_242_cov_2.151220_g11914_i0 PRJNA436017 12212 242 2.15122 5.2059524 Edaphobacter flagellatus 1933044 Bacteria Bacteria 448 2.3799999999999995e-121   NTclustered gi|2304905232|gb|CP073697.1| 1933044 g11914 i0 100 123.595041322314 242 0 100 0 1 242 3268130 3267889 Edaphobacter flagellatus strain HZ411 chromosome, complete genome blastn 29910 448 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter flagellatus
14459572 14459572 PRJNA436017_P_NODE_19952_length_183_cov_1.301370_g19654_i0 PRJNA436017 19952 183 1.30137 2.3815071 Edaphobacter flagellatus 1933044 Bacteria Bacteria 339 1.07e-88   NTclustered gi|2304905232|gb|CP073697.1| 1933044 g19654 i0 100 119.393442622951 183 0 100 0 1 183 3268630 3268812 Edaphobacter flagellatus strain HZ411 chromosome, complete genome blastn 21849 339 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter flagellatus
15733583 15733583 PRJNA436017_P_NODE_5373_length_391_cov_1.858757_g5077_i0 PRJNA436017 5373 391 1.858757 7.26773987 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 163 1.66e-35   NTclustered gi|2874253885|emb|OY970060.1| 171953 g5077 i0 75.881 1.90281329923274 369 61 91 18 3 356 4746910 4746555 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 744 163 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
22107455 22107455 PRJNA436017_P_NODE_26418_length_159_cov_0.918033_g26120_i0 PRJNA436017 26418 159 0.918033 1.4596724700000001 uncultured Holophaga sp. 188475 Bacteria Bacteria 62.1 2.19e-5   NTclustered gi|2621702213|emb|OY760195.1| 188475 g26120 i0 92.857 0.547169811320755 42 3 26 0 94 135 2189992 2189951 MAG: uncultured Holophaga sp. isolate 19663c38-e6f5-42a8-8268-146037a524bf genome assembly, chromosome: 1 blastn 87 62.1 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Holophaga uncultured Holophaga sp.
22766068 22766068 PRJNA436017_P_NODE_7218_length_331_cov_2.428571_g6921_i0 PRJNA436017 7218 331 2.428571 8.03857001 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 374 5.859999999999998e-99   NTclustered gi|76574288|gb|DQ139436.1| 171953 g6921 i0 87.195 81.6435045317221 328 42 99 0 1 328 19 346 Uncultured Acidobacteria bacterium clone CAL6 23S ribosomal RNA gene, partial sequence blastn 27024 374 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
23383053 23383053 PRJNA436017_P_NODE_24799_length_164_cov_1.196850_g24501_i0 PRJNA436017 24799 164 1.19685 1.962834 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 122 1.03e-23   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g24501 i0 97.222 0.439024390243902 72 2 44 0 91 162 4108411 4108482 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 72 122 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
23383196 23383196 PRJNA436017_P_NODE_6039_length_365_cov_1.875000_g5743_i0 PRJNA436017 6039 365 1.875 6.84375 Edaphobacter flagellatus 1933044 Bacteria Bacteria 527 4.719999999999998e-145   NTclustered gi|2304905232|gb|CP073697.1| 1933044 g5743 i0 93.539 319.142465753425 356 20 97 2 11 365 3268185 3268538 Edaphobacter flagellatus strain HZ411 chromosome, complete genome blastn 116487 527 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter flagellatus
26791102 26791102 PRJNA436017_P_NODE_22101_length_174_cov_1.138686_g21803_i0 PRJNA436017 22101 174 1.138686 1.98131364 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 59.3 1.06e-8   NR HXQ24409.1 2952895 g21803 i0 78 0.706896551724138 41 9 70.7 0 50 172 45 85 HXQ24409.1 50S ribosomal protein L10 [Candidatus Acidiferrales bacterium] diamond 123 59.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
27075821 27075821 PRJNA436017_P_NODE_23302_length_169_cov_1.181818_g23004_i0 PRJNA436017 23302 169 1.181818 1.99727242 Acidobacteriota bacterium 1978231 Bacteria Bacteria 76.3 2.05e-14   NR MDJ0840096.1 1978231 g23004 i0 58.9 5.96449704142012 56 23 99.4 0 2 169 225 280 MDJ0840096.1 M20 family metallopeptidase [Acidobacteriota bacterium] diamond 1008 76.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27518226 27518226 PRJNA436017_P_NODE_28403_length_153_cov_1.344828_g28105_i0 PRJNA436017 28403 153 1.344828 2.05758684 Acidobacteriota bacterium 1978231 Bacteria Bacteria 63.9 2.13e-10   NR HLP24116.1 1978231 g28105 i0 60 2.98039215686275 50 20 98 0 153 4 150 199 HLP24116.1 HAD-IIB family hydrolase [Acidobacteriota bacterium] diamond 456 63.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28212581 28212581 PRJNA436017_P_NODE_10686_length_263_cov_1.362832_g10388_i0 PRJNA436017 10686 263 1.362832 3.58424816 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 119 5.64e-29   NR HEX8286473.1 2283092 g10388 i0 62.1 0.992395437262357 87 33 99.2 0 263 3 427 513 HEX8286473.1 TonB-dependent receptor [Pyrinomonadaceae bacterium] diamond 261 119 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28939173 28939173 PRJNA436017_P_NODE_3708_length_484_cov_10.228188_g3424_i0 PRJNA436017 3708 484 10.228188 49.50442992 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 55.8 1.39e-6   NR HEY8561019.1 2283092 g3424 i0 63 0.334710743801653 54 17 33.5 2 235 396 76 126 HEY8561019.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 162 55.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29145223 29145223 PRJNA436017_P_NODE_23829_length_167_cov_1.461538_g23531_i0 PRJNA436017 23829 167 1.461538 2.44076846 Bacteria 2 Bacteria Bacteria 47 2.78e-4   NR MDQ3089409.1 1978231 g23531 i0 74.1 2.4251497005988 27 7 48.5 0 167 87 109 135 MDQ3089409.1 energy transducer TonB [Acidobacteriota bacterium] diamond 405 47 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30123697 30123697 PRJNA436017_P_NODE_27792_length_155_cov_1.288136_g27494_i0 PRJNA436017 27792 155 1.288136 1.9966108 Pseudomonadati 3379134 Bacteria Bacteria 90.1 2.04e-19   NR HBL31187.1 1978231 g27494 i0 88.2 5.90322580645161 51 6 98.7 0 154 2 239 289 HBL31187.1 hypothetical protein [Acidobacteriota bacterium] diamond 915 90.9 0.991199119911991 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30282212 30282212 PRJNA436017_P_NODE_29812_length_150_cov_0.973451_g29514_i0 PRJNA436017 29812 150 0.973451 1.4601765 Pseudomonadati 3379134 Bacteria Bacteria 78.6 1.21e-16   NR HZN11135.1 2052146 g29514 i0 72 16.92 50 14 100 0 150 1 42 91 HZN11135.1 tail fiber protein [Blastocatellia bacterium] diamond 2538 78.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30897490 30897490 PRJNA436017_P_NODE_18274_length_192_cov_0.980645_g17976_i0 PRJNA436017 18274 192 0.980645 1.8828384 Bryobacterales bacterium 2026791 Bacteria Bacteria 52.8 5.38e-6   NR MBV9769597.1 2026791 g17976 i0 50.9 3.65625 57 28 89.1 0 17 187 385 441 MBV9769597.1 DegQ family serine endoprotease [Bryobacterales bacterium] diamond 702 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
31339729 31339729 PRJNA436017_P_NODE_26076_length_160_cov_0.926829_g25778_i0 PRJNA436017 26076 160 0.926829 1.4829264 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 100 2.4e-26   NR MEO6589170.1 2283092 g25778 i0 98 0.9375 50 1 93.8 0 10 159 1 50 MEO6589170.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 150 100 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32257561 32257561 PRJNA436017_P_NODE_28398_length_153_cov_1.344828_g28100_i0 PRJNA436017 28398 153 1.344828 2.05758684 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 83.2 5.92e-17   NR MCD9187273.1 2283092 g28100 i0 81.3 0.941176470588235 48 9 94.1 0 148 5 169 216 MCD9187273.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 144 83.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;