contig_metadata
6 rows where bioproject = "PRJNA436017", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2364481 | 2364481 | PRJNA436017_P_NODE_21442_length_176_cov_2.935252_g21144_i0 | PRJNA436017 | 21442 | 176 | 2.935252 | 5.16604352 | Geotalea | 2910589 | Bacteria | Bacteria | 202 | 1.39e-47 | NTclustered | gi|221562406|gb|CP001390.1| | 316067 | g21144 | i0 | 87.363 | 152.011363636364 | 182 | 15 | 100 | 8 | 1 | 176 | 2114175 | 2113996 | Geobacter daltonii FRC-32, complete genome | blastn | 26754 | 202 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geotalea | Geotalea daltonii | ||
| 2364552 | 2364552 | PRJNA436017_P_NODE_6002_length_366_cov_2.212766_g5706_i0 | PRJNA436017 | 6002 | 366 | 2.212766 | 8.09872356 | Geomonas | 2651583 | Bacteria | Bacteria | 350 | 1.1e-91 | NTclustered | gi|2233265061|gb|CP096574.1| | 2740185 | g5706 | i0 | 84.239 | 246.950819672131 | 368 | 48 | 99 | 9 | 1 | 364 | 884916 | 884555 | Geomonas paludis strain RG22 chromosome, complete genome | blastn | 90384 | 350 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas paludis | ||
| 24040791 | 24040791 | PRJNA436017_P_NODE_15879_length_207_cov_1.570588_g15581_i0 | PRJNA436017 | 15879 | 207 | 1.570588 | 3.25111716 | Geobacteraceae | 213422 | Bacteria | Bacteria | 185 | 1.71e-42 | NTclustered | gi|2004017374|gb|CP071382.1| | 2815309 | g15581 | i0 | 83.092 | 178.207729468599 | 207 | 31 | 99 | 4 | 1 | 205 | 489019 | 489223 | Geobacter benzoatilyticus strain Jerry-YX chromosome, complete genome | blastn | 36889 | 185 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter benzoatilyticus | ||
| 28355458 | 28355458 | PRJNA436017_P_NODE_1886_length_688_cov_7.327189_g1655_i0 | PRJNA436017 | 1886 | 688 | 7.327189 | 50.41106032 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 234 | 2.82e-74 | NR | UCD79363.1 | 2044940 | g1655 | i0 | 53.5 | 2.80813953488372 | 213 | 98 | 92.4 | 1 | 17 | 652 | 5 | 217 | UCD79363.1 MAG: nitroreductase family protein [Desulfobacterales bacterium] | diamond | 1932 | 236 | 0.991525423728814 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 29443980 | 29443980 | PRJNA436017_P_NODE_16370_length_204_cov_0.922156_g16072_i0 | PRJNA436017 | 16370 | 204 | 0.922156 | 1.88119824 | Desulfuromonadales bacterium | 2099678 | Bacteria | Bacteria | 80.9 | 6.15e-17 | NR | HXV19802.1 | 2099678 | g16072 | i0 | 56.7 | 6.13235294117647 | 60 | 26 | 88.2 | 0 | 1 | 180 | 121 | 180 | HXV19802.1 5-formyltetrahydrofolate cyclo-ligase [Desulfuromonadales bacterium] | diamond | 1251 | 80.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadales bacterium | ||||
| 31197686 | 31197686 | PRJNA436017_P_NODE_21975_length_174_cov_1.948905_g21677_i0 | PRJNA436017 | 21975 | 174 | 1.948905 | 3.3910947 | Bacteria | 2 | Bacteria | Bacteria | 56.2 | 5.59e-8 | NR | PIV06593.1 | 1974100 | g21677 | i0 | 78.1 | 2.75862068965517 | 32 | 7 | 55.2 | 0 | 2 | 97 | 106 | 137 | PIV06593.1 MAG: nucleoside-diphosphate kinase [Syntrophobacterales bacterium CG03_land_8_20_14_0_80_58_14] | diamond | 480 | 56.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacterales bacterium CG03_land_8_20_14_0_80_58_14 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;