RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA436017", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 5 ✖

tax_kingdom 1

  • Metazoa · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA436017 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3640039 3640039 PRJNA436017_P_NODE_14603_length_218_cov_0.839779_g14305_i0 PRJNA436017 14603 218 0.839779 1.83071822 Metazoa 33208 Porifera other_Eukaryota 198 2.3399999999999998e-46   NTclustered gi|1143566819|gb|KX154218.1| 121494 g14305 i0 83.333 30.5229357798165 216 34 99 2 2 216 10 224 Oscarella lobularis clone A actin mRNA, partial cds blastn 6654 198 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
15116856 15116856 PRJNA436017_P_NODE_23792_length_167_cov_1.676923_g23494_i0 PRJNA436017 23792 167 1.676923 2.80046141 Demospongiae 6042 Porifera other_Eukaryota 121 3.789999999999999e-23   NTclustered gi|164421113|ref|NC_010198.1| 458489 g23494 i0 88.35 55.4910179640719 103 9 60 2 1 101 2057 2158 Cinachyrella kuekenthali mitochondrion, complete genome blastn 9267 121 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Tetillidae Cinachyrella Cinachyrella kuekenthali
24040811 24040811 PRJNA436017_P_NODE_18899_length_188_cov_2.033113_g18601_i0 PRJNA436017 18899 188 2.033113 3.82225244 Demospongiae 6042 Porifera other_Eukaryota 54.7 0.004   NTclustered gi|2644120949|gb|OM729606.2| 85783 g18601 i0 92.105 1.41489361702128 38 3 20 0 150 187 19210 19173 Acanthella acuta mitochondrion, complete genome blastn 266 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Bubarida Dictyonellidae Acanthella Acanthella acuta
26632657 26632657 PRJNA436017_P_NODE_28941_length_152_cov_1.017391_g28643_i0 PRJNA436017 28941 152 1.017391 1.54643432 Oopsacas minuta 111878 Porifera other_Eukaryota 72.4 1.41e-13   NR KAI6656485.1 111878 g28643 i0 62 0.986842105263158 50 19 98.7 0 152 3 90 139 KAI6656485.1 DNA ligase III [Oopsacas minuta] diamond 150 72.4 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
32747358 32747358 PRJNA436017_P_NODE_3480_length_501_cov_4.034483_g3199_i0 PRJNA436017 3480 501 4.034483 20.21275983 root 1 Root_unresolved Root_unresolved 49.3 5.53e-4   NR XP_003388485.1 400682 g3199 i0 30.9 1.51497005988024 81 55 48.5 1 285 43 50 129 XP_003388485.1 PREDICTED: cofilin-like [Amphimedon queenslandica] diamond 759 49.3 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;